Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23435 | 70528;70529;70530 | chr2:178575829;178575828;178575827 | chr2:179440556;179440555;179440554 |
N2AB | 21794 | 65605;65606;65607 | chr2:178575829;178575828;178575827 | chr2:179440556;179440555;179440554 |
N2A | 20867 | 62824;62825;62826 | chr2:178575829;178575828;178575827 | chr2:179440556;179440555;179440554 |
N2B | 14370 | 43333;43334;43335 | chr2:178575829;178575828;178575827 | chr2:179440556;179440555;179440554 |
Novex-1 | 14495 | 43708;43709;43710 | chr2:178575829;178575828;178575827 | chr2:179440556;179440555;179440554 |
Novex-2 | 14562 | 43909;43910;43911 | chr2:178575829;178575828;178575827 | chr2:179440556;179440555;179440554 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 0.893 | N | 0.561 | 0.354 | 0.277317399466 | gnomAD-4.0.0 | 2.05297E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69883E-06 | 0 | 0 |
T/M | rs1324845938 | None | 0.793 | N | 0.521 | 0.414 | 0.423836183345 | gnomAD-4.0.0 | 8.89624E-06 | None | None | None | None | I | None | 2.98918E-05 | 2.23624E-05 | None | 0 | 2.52169E-05 | None | 0 | 0 | 7.19689E-06 | 1.15955E-05 | 1.65684E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.221 | likely_benign | 0.2952 | benign | -0.813 | Destabilizing | 0.045 | N | 0.403 | neutral | N | 0.486355236 | None | None | I |
T/C | 0.6496 | likely_pathogenic | 0.734 | pathogenic | -0.472 | Destabilizing | 0.996 | D | 0.565 | neutral | None | None | None | None | I |
T/D | 0.9202 | likely_pathogenic | 0.9503 | pathogenic | -0.078 | Destabilizing | 0.767 | D | 0.509 | neutral | None | None | None | None | I |
T/E | 0.8535 | likely_pathogenic | 0.9044 | pathogenic | -0.139 | Destabilizing | 0.757 | D | 0.547 | neutral | None | None | None | None | I |
T/F | 0.8243 | likely_pathogenic | 0.8875 | pathogenic | -1.236 | Destabilizing | 0.976 | D | 0.791 | deleterious | None | None | None | None | I |
T/G | 0.5745 | likely_pathogenic | 0.6591 | pathogenic | -0.963 | Destabilizing | 0.797 | D | 0.59 | neutral | None | None | None | None | I |
T/H | 0.6691 | likely_pathogenic | 0.7543 | pathogenic | -1.329 | Destabilizing | 0.997 | D | 0.762 | deleterious | None | None | None | None | I |
T/I | 0.6284 | likely_pathogenic | 0.7123 | pathogenic | -0.523 | Destabilizing | 0.885 | D | 0.501 | neutral | None | None | None | None | I |
T/K | 0.618 | likely_pathogenic | 0.7126 | pathogenic | -0.528 | Destabilizing | 0.893 | D | 0.561 | neutral | N | 0.459072634 | None | None | I |
T/L | 0.4484 | ambiguous | 0.5247 | ambiguous | -0.523 | Destabilizing | 0.429 | N | 0.465 | neutral | None | None | None | None | I |
T/M | 0.2779 | likely_benign | 0.3442 | ambiguous | -0.063 | Destabilizing | 0.793 | D | 0.521 | neutral | N | 0.482252612 | None | None | I |
T/N | 0.4727 | ambiguous | 0.5748 | pathogenic | -0.335 | Destabilizing | 0.767 | D | 0.458 | neutral | None | None | None | None | I |
T/P | 0.505 | ambiguous | 0.5788 | pathogenic | -0.592 | Destabilizing | 0.834 | D | 0.551 | neutral | N | 0.490835549 | None | None | I |
T/Q | 0.6388 | likely_pathogenic | 0.723 | pathogenic | -0.668 | Destabilizing | 0.936 | D | 0.567 | neutral | None | None | None | None | I |
T/R | 0.6026 | likely_pathogenic | 0.7028 | pathogenic | -0.221 | Destabilizing | 0.987 | D | 0.553 | neutral | N | 0.468481551 | None | None | I |
T/S | 0.1434 | likely_benign | 0.1883 | benign | -0.624 | Destabilizing | 0.003 | N | 0.185 | neutral | N | 0.442932532 | None | None | I |
T/V | 0.4072 | ambiguous | 0.4802 | ambiguous | -0.592 | Destabilizing | 0.61 | D | 0.388 | neutral | None | None | None | None | I |
T/W | 0.9652 | likely_pathogenic | 0.9785 | pathogenic | -1.113 | Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | I |
T/Y | 0.7922 | likely_pathogenic | 0.856 | pathogenic | -0.877 | Destabilizing | 0.988 | D | 0.799 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.