Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23438 | 70537;70538;70539 | chr2:178575820;178575819;178575818 | chr2:179440547;179440546;179440545 |
N2AB | 21797 | 65614;65615;65616 | chr2:178575820;178575819;178575818 | chr2:179440547;179440546;179440545 |
N2A | 20870 | 62833;62834;62835 | chr2:178575820;178575819;178575818 | chr2:179440547;179440546;179440545 |
N2B | 14373 | 43342;43343;43344 | chr2:178575820;178575819;178575818 | chr2:179440547;179440546;179440545 |
Novex-1 | 14498 | 43717;43718;43719 | chr2:178575820;178575819;178575818 | chr2:179440547;179440546;179440545 |
Novex-2 | 14565 | 43918;43919;43920 | chr2:178575820;178575819;178575818 | chr2:179440547;179440546;179440545 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | N | 0.89 | 0.486 | 0.795181792715 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1151 | likely_benign | 0.1299 | benign | -1.371 | Destabilizing | 0.999 | D | 0.845 | deleterious | N | 0.487403746 | None | None | I |
P/C | 0.6624 | likely_pathogenic | 0.7181 | pathogenic | -0.816 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
P/D | 0.8524 | likely_pathogenic | 0.8824 | pathogenic | -1.248 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | I |
P/E | 0.5614 | ambiguous | 0.6222 | pathogenic | -1.301 | Destabilizing | 0.999 | D | 0.839 | deleterious | None | None | None | None | I |
P/F | 0.8349 | likely_pathogenic | 0.8741 | pathogenic | -1.204 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | I |
P/G | 0.5776 | likely_pathogenic | 0.6274 | pathogenic | -1.633 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | I |
P/H | 0.4857 | ambiguous | 0.5492 | ambiguous | -1.151 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
P/I | 0.6549 | likely_pathogenic | 0.7151 | pathogenic | -0.767 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
P/K | 0.5258 | ambiguous | 0.6001 | pathogenic | -1.061 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
P/L | 0.3701 | ambiguous | 0.4332 | ambiguous | -0.767 | Destabilizing | 1.0 | D | 0.89 | deleterious | N | 0.517887324 | None | None | I |
P/M | 0.56 | ambiguous | 0.6246 | pathogenic | -0.5 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
P/N | 0.6731 | likely_pathogenic | 0.7181 | pathogenic | -0.735 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | I |
P/Q | 0.3448 | ambiguous | 0.4099 | ambiguous | -1.003 | Destabilizing | 1.0 | D | 0.85 | deleterious | N | 0.512492046 | None | None | I |
P/R | 0.3854 | ambiguous | 0.4661 | ambiguous | -0.472 | Destabilizing | 1.0 | D | 0.896 | deleterious | N | 0.507403165 | None | None | I |
P/S | 0.2909 | likely_benign | 0.3355 | benign | -1.199 | Destabilizing | 1.0 | D | 0.842 | deleterious | N | 0.495286391 | None | None | I |
P/T | 0.2809 | likely_benign | 0.3307 | benign | -1.155 | Destabilizing | 1.0 | D | 0.833 | deleterious | N | 0.50602404 | None | None | I |
P/V | 0.4515 | ambiguous | 0.5114 | ambiguous | -0.934 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | I |
P/W | 0.9368 | likely_pathogenic | 0.9544 | pathogenic | -1.312 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
P/Y | 0.8333 | likely_pathogenic | 0.8711 | pathogenic | -1.055 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.