Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23441 | 70546;70547;70548 | chr2:178575811;178575810;178575809 | chr2:179440538;179440537;179440536 |
N2AB | 21800 | 65623;65624;65625 | chr2:178575811;178575810;178575809 | chr2:179440538;179440537;179440536 |
N2A | 20873 | 62842;62843;62844 | chr2:178575811;178575810;178575809 | chr2:179440538;179440537;179440536 |
N2B | 14376 | 43351;43352;43353 | chr2:178575811;178575810;178575809 | chr2:179440538;179440537;179440536 |
Novex-1 | 14501 | 43726;43727;43728 | chr2:178575811;178575810;178575809 | chr2:179440538;179440537;179440536 |
Novex-2 | 14568 | 43927;43928;43929 | chr2:178575811;178575810;178575809 | chr2:179440538;179440537;179440536 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs751179969 | 0.266 | 0.117 | N | 0.287 | 0.12 | 0.126345400529 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/K | rs751179969 | 0.266 | 0.117 | N | 0.287 | 0.12 | 0.126345400529 | gnomAD-4.0.0 | 6.84472E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99824E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3028 | likely_benign | 0.3673 | ambiguous | -0.371 | Destabilizing | 0.966 | D | 0.583 | neutral | None | None | None | None | I |
N/C | 0.3177 | likely_benign | 0.3915 | ambiguous | 0.268 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
N/D | 0.2044 | likely_benign | 0.2398 | benign | 0.119 | Stabilizing | 0.977 | D | 0.484 | neutral | N | 0.515425428 | None | None | I |
N/E | 0.5174 | ambiguous | 0.6121 | pathogenic | 0.122 | Stabilizing | 0.966 | D | 0.505 | neutral | None | None | None | None | I |
N/F | 0.6236 | likely_pathogenic | 0.7026 | pathogenic | -0.524 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
N/G | 0.275 | likely_benign | 0.308 | benign | -0.602 | Destabilizing | 0.983 | D | 0.431 | neutral | None | None | None | None | I |
N/H | 0.1086 | likely_benign | 0.1273 | benign | -0.52 | Destabilizing | 0.997 | D | 0.618 | neutral | N | 0.487215904 | None | None | I |
N/I | 0.5426 | ambiguous | 0.6461 | pathogenic | 0.162 | Stabilizing | 0.997 | D | 0.767 | deleterious | N | 0.511067377 | None | None | I |
N/K | 0.3763 | ambiguous | 0.4809 | ambiguous | 0.001 | Stabilizing | 0.117 | N | 0.287 | neutral | N | 0.481099837 | None | None | I |
N/L | 0.4105 | ambiguous | 0.4858 | ambiguous | 0.162 | Stabilizing | 0.995 | D | 0.679 | prob.neutral | None | None | None | None | I |
N/M | 0.5151 | ambiguous | 0.5975 | pathogenic | 0.405 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
N/P | 0.8574 | likely_pathogenic | 0.9033 | pathogenic | 0.013 | Stabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | I |
N/Q | 0.3507 | ambiguous | 0.4187 | ambiguous | -0.451 | Destabilizing | 0.995 | D | 0.641 | neutral | None | None | None | None | I |
N/R | 0.3834 | ambiguous | 0.4781 | ambiguous | 0.026 | Stabilizing | 0.99 | D | 0.588 | neutral | None | None | None | None | I |
N/S | 0.1119 | likely_benign | 0.1238 | benign | -0.318 | Destabilizing | 0.977 | D | 0.409 | neutral | N | 0.508366169 | None | None | I |
N/T | 0.2671 | likely_benign | 0.3276 | benign | -0.154 | Destabilizing | 0.977 | D | 0.535 | neutral | N | 0.492963122 | None | None | I |
N/V | 0.5011 | ambiguous | 0.5997 | pathogenic | 0.013 | Stabilizing | 0.995 | D | 0.752 | deleterious | None | None | None | None | I |
N/W | 0.8557 | likely_pathogenic | 0.9057 | pathogenic | -0.451 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
N/Y | 0.2481 | likely_benign | 0.3108 | benign | -0.207 | Destabilizing | 0.999 | D | 0.74 | deleterious | D | 0.538325891 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.