Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23442 | 70549;70550;70551 | chr2:178575808;178575807;178575806 | chr2:179440535;179440534;179440533 |
N2AB | 21801 | 65626;65627;65628 | chr2:178575808;178575807;178575806 | chr2:179440535;179440534;179440533 |
N2A | 20874 | 62845;62846;62847 | chr2:178575808;178575807;178575806 | chr2:179440535;179440534;179440533 |
N2B | 14377 | 43354;43355;43356 | chr2:178575808;178575807;178575806 | chr2:179440535;179440534;179440533 |
Novex-1 | 14502 | 43729;43730;43731 | chr2:178575808;178575807;178575806 | chr2:179440535;179440534;179440533 |
Novex-2 | 14569 | 43930;43931;43932 | chr2:178575808;178575807;178575806 | chr2:179440535;179440534;179440533 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | rs1553614105 | None | 0.949 | N | 0.645 | 0.355 | 0.568785453283 | gnomAD-4.0.0 | 1.36897E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79969E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9417 | likely_pathogenic | 0.9565 | pathogenic | -2.456 | Highly Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
L/C | 0.8528 | likely_pathogenic | 0.8887 | pathogenic | -1.757 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
L/D | 0.999 | likely_pathogenic | 0.9993 | pathogenic | -2.709 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/E | 0.9946 | likely_pathogenic | 0.9961 | pathogenic | -2.565 | Highly Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
L/F | 0.3619 | ambiguous | 0.5159 | ambiguous | -1.525 | Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
L/G | 0.9881 | likely_pathogenic | 0.9916 | pathogenic | -2.942 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
L/H | 0.9743 | likely_pathogenic | 0.9841 | pathogenic | -2.382 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/I | 0.133 | likely_benign | 0.1502 | benign | -1.087 | Destabilizing | 0.937 | D | 0.731 | prob.delet. | None | None | None | None | N |
L/K | 0.9879 | likely_pathogenic | 0.9907 | pathogenic | -1.909 | Destabilizing | 0.995 | D | 0.853 | deleterious | None | None | None | None | N |
L/M | 0.2884 | likely_benign | 0.331 | benign | -0.967 | Destabilizing | 0.949 | D | 0.645 | neutral | N | 0.516328205 | None | None | N |
L/N | 0.9905 | likely_pathogenic | 0.9933 | pathogenic | -2.011 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/P | 0.9408 | likely_pathogenic | 0.9604 | pathogenic | -1.521 | Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.527186791 | None | None | N |
L/Q | 0.9735 | likely_pathogenic | 0.9814 | pathogenic | -2.007 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.540219358 | None | None | N |
L/R | 0.978 | likely_pathogenic | 0.9836 | pathogenic | -1.484 | Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.540219358 | None | None | N |
L/S | 0.9876 | likely_pathogenic | 0.9916 | pathogenic | -2.664 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
L/T | 0.9187 | likely_pathogenic | 0.9347 | pathogenic | -2.389 | Highly Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
L/V | 0.1729 | likely_benign | 0.196 | benign | -1.521 | Destabilizing | 0.282 | N | 0.483 | neutral | N | 0.473906879 | None | None | N |
L/W | 0.912 | likely_pathogenic | 0.9476 | pathogenic | -1.866 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
L/Y | 0.9271 | likely_pathogenic | 0.9581 | pathogenic | -1.615 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.