Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23444 | 70555;70556;70557 | chr2:178575802;178575801;178575800 | chr2:179440529;179440528;179440527 |
N2AB | 21803 | 65632;65633;65634 | chr2:178575802;178575801;178575800 | chr2:179440529;179440528;179440527 |
N2A | 20876 | 62851;62852;62853 | chr2:178575802;178575801;178575800 | chr2:179440529;179440528;179440527 |
N2B | 14379 | 43360;43361;43362 | chr2:178575802;178575801;178575800 | chr2:179440529;179440528;179440527 |
Novex-1 | 14504 | 43735;43736;43737 | chr2:178575802;178575801;178575800 | chr2:179440529;179440528;179440527 |
Novex-2 | 14571 | 43936;43937;43938 | chr2:178575802;178575801;178575800 | chr2:179440529;179440528;179440527 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs1325284144 | None | 0.997 | N | 0.869 | 0.398 | 0.446813524615 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/R | rs1325284144 | None | 0.997 | N | 0.869 | 0.398 | 0.446813524615 | gnomAD-4.0.0 | 5.12919E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.58414E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1093 | likely_benign | 0.1155 | benign | -1.782 | Destabilizing | 0.117 | N | 0.33 | neutral | N | 0.392549358 | None | None | N |
P/C | 0.5105 | ambiguous | 0.5189 | ambiguous | -1.181 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
P/D | 0.9384 | likely_pathogenic | 0.955 | pathogenic | -1.711 | Destabilizing | 0.998 | D | 0.802 | deleterious | None | None | None | None | N |
P/E | 0.8015 | likely_pathogenic | 0.8357 | pathogenic | -1.622 | Destabilizing | 0.995 | D | 0.772 | deleterious | None | None | None | None | N |
P/F | 0.7037 | likely_pathogenic | 0.7262 | pathogenic | -1.216 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
P/G | 0.6116 | likely_pathogenic | 0.6584 | pathogenic | -2.195 | Highly Destabilizing | 0.966 | D | 0.701 | prob.neutral | None | None | None | None | N |
P/H | 0.6056 | likely_pathogenic | 0.6503 | pathogenic | -1.694 | Destabilizing | 1.0 | D | 0.827 | deleterious | N | 0.475074741 | None | None | N |
P/I | 0.2878 | likely_benign | 0.2801 | benign | -0.701 | Destabilizing | 0.995 | D | 0.863 | deleterious | None | None | None | None | N |
P/K | 0.805 | likely_pathogenic | 0.8428 | pathogenic | -1.525 | Destabilizing | 0.995 | D | 0.778 | deleterious | None | None | None | None | N |
P/L | 0.1909 | likely_benign | 0.1943 | benign | -0.701 | Destabilizing | 0.993 | D | 0.797 | deleterious | N | 0.396611171 | None | None | N |
P/M | 0.4122 | ambiguous | 0.446 | ambiguous | -0.548 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
P/N | 0.7934 | likely_pathogenic | 0.8391 | pathogenic | -1.458 | Destabilizing | 0.998 | D | 0.871 | deleterious | None | None | None | None | N |
P/Q | 0.5652 | likely_pathogenic | 0.6199 | pathogenic | -1.495 | Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
P/R | 0.7124 | likely_pathogenic | 0.7596 | pathogenic | -1.104 | Destabilizing | 0.997 | D | 0.869 | deleterious | N | 0.511899546 | None | None | N |
P/S | 0.352 | ambiguous | 0.4018 | ambiguous | -2.039 | Highly Destabilizing | 0.955 | D | 0.699 | prob.neutral | N | 0.474381308 | None | None | N |
P/T | 0.1842 | likely_benign | 0.2123 | benign | -1.817 | Destabilizing | 0.993 | D | 0.751 | deleterious | N | 0.434150839 | None | None | N |
P/V | 0.1876 | likely_benign | 0.1799 | benign | -1.029 | Destabilizing | 0.99 | D | 0.772 | deleterious | None | None | None | None | N |
P/W | 0.8961 | likely_pathogenic | 0.9127 | pathogenic | -1.496 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
P/Y | 0.7193 | likely_pathogenic | 0.7493 | pathogenic | -1.182 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.