Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23448 | 70567;70568;70569 | chr2:178575790;178575789;178575788 | chr2:179440517;179440516;179440515 |
N2AB | 21807 | 65644;65645;65646 | chr2:178575790;178575789;178575788 | chr2:179440517;179440516;179440515 |
N2A | 20880 | 62863;62864;62865 | chr2:178575790;178575789;178575788 | chr2:179440517;179440516;179440515 |
N2B | 14383 | 43372;43373;43374 | chr2:178575790;178575789;178575788 | chr2:179440517;179440516;179440515 |
Novex-1 | 14508 | 43747;43748;43749 | chr2:178575790;178575789;178575788 | chr2:179440517;179440516;179440515 |
Novex-2 | 14575 | 43948;43949;43950 | chr2:178575790;178575789;178575788 | chr2:179440517;179440516;179440515 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.371 | N | 0.441 | 0.228 | 0.151104730317 | gnomAD-4.0.0 | 1.59277E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41429E-04 | 0 | 0 | 0 |
T/R | None | None | 0.999 | N | 0.455 | 0.352 | 0.568465717781 | gnomAD-4.0.0 | 1.59278E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86218E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1177 | likely_benign | 0.143 | benign | -0.836 | Destabilizing | 0.371 | N | 0.441 | neutral | N | 0.487465712 | None | None | N |
T/C | 0.3666 | ambiguous | 0.419 | ambiguous | -0.603 | Destabilizing | 0.227 | N | 0.398 | neutral | None | None | None | None | N |
T/D | 0.4115 | ambiguous | 0.4492 | ambiguous | -0.547 | Destabilizing | 0.996 | D | 0.453 | neutral | None | None | None | None | N |
T/E | 0.446 | ambiguous | 0.5024 | ambiguous | -0.56 | Destabilizing | 0.996 | D | 0.441 | neutral | None | None | None | None | N |
T/F | 0.453 | ambiguous | 0.5267 | ambiguous | -1.094 | Destabilizing | 0.998 | D | 0.535 | neutral | None | None | None | None | N |
T/G | 0.1592 | likely_benign | 0.1691 | benign | -1.056 | Destabilizing | 0.999 | D | 0.478 | neutral | None | None | None | None | N |
T/H | 0.2703 | likely_benign | 0.2951 | benign | -1.426 | Destabilizing | 1.0 | D | 0.517 | neutral | None | None | None | None | N |
T/I | 0.4976 | ambiguous | 0.6079 | pathogenic | -0.345 | Destabilizing | 0.986 | D | 0.422 | neutral | N | 0.513091612 | None | None | N |
T/K | 0.2216 | likely_benign | 0.2552 | benign | -0.675 | Destabilizing | 0.997 | D | 0.413 | neutral | N | 0.521986041 | None | None | N |
T/L | 0.1671 | likely_benign | 0.2055 | benign | -0.345 | Destabilizing | 0.794 | D | 0.432 | neutral | None | None | None | None | N |
T/M | 0.1437 | likely_benign | 0.1696 | benign | 0.078 | Stabilizing | 0.918 | D | 0.393 | neutral | None | None | None | None | N |
T/N | 0.1263 | likely_benign | 0.1422 | benign | -0.65 | Destabilizing | 0.996 | D | 0.423 | neutral | None | None | None | None | N |
T/P | 0.6866 | likely_pathogenic | 0.7643 | pathogenic | -0.478 | Destabilizing | 0.995 | D | 0.456 | neutral | N | 0.521485403 | None | None | N |
T/Q | 0.2189 | likely_benign | 0.2368 | benign | -0.929 | Destabilizing | 0.994 | D | 0.439 | neutral | None | None | None | None | N |
T/R | 0.1912 | likely_benign | 0.2244 | benign | -0.404 | Destabilizing | 0.999 | D | 0.455 | neutral | N | 0.520023171 | None | None | N |
T/S | 0.0817 | likely_benign | 0.0844 | benign | -0.899 | Destabilizing | 0.74 | D | 0.45 | neutral | N | 0.471882507 | None | None | N |
T/V | 0.3233 | likely_benign | 0.4012 | ambiguous | -0.478 | Destabilizing | 0.951 | D | 0.398 | neutral | None | None | None | None | N |
T/W | 0.7608 | likely_pathogenic | 0.8088 | pathogenic | -1.005 | Destabilizing | 1.0 | D | 0.544 | neutral | None | None | None | None | N |
T/Y | 0.4563 | ambiguous | 0.5199 | ambiguous | -0.743 | Destabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.