Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23452 | 70579;70580;70581 | chr2:178575778;178575777;178575776 | chr2:179440505;179440504;179440503 |
N2AB | 21811 | 65656;65657;65658 | chr2:178575778;178575777;178575776 | chr2:179440505;179440504;179440503 |
N2A | 20884 | 62875;62876;62877 | chr2:178575778;178575777;178575776 | chr2:179440505;179440504;179440503 |
N2B | 14387 | 43384;43385;43386 | chr2:178575778;178575777;178575776 | chr2:179440505;179440504;179440503 |
Novex-1 | 14512 | 43759;43760;43761 | chr2:178575778;178575777;178575776 | chr2:179440505;179440504;179440503 |
Novex-2 | 14579 | 43960;43961;43962 | chr2:178575778;178575777;178575776 | chr2:179440505;179440504;179440503 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.018 | N | 0.187 | 0.118 | 0.20549828249 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3667 | ambiguous | 0.3407 | ambiguous | -2.374 | Highly Destabilizing | 0.936 | D | 0.625 | neutral | N | 0.473922735 | None | None | N |
V/C | 0.7314 | likely_pathogenic | 0.7471 | pathogenic | -2.574 | Highly Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
V/D | 0.9932 | likely_pathogenic | 0.9937 | pathogenic | -2.998 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.545843855 | None | None | N |
V/E | 0.9846 | likely_pathogenic | 0.9853 | pathogenic | -2.749 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/F | 0.5155 | ambiguous | 0.6421 | pathogenic | -1.574 | Destabilizing | 0.996 | D | 0.845 | deleterious | N | 0.521699213 | None | None | N |
V/G | 0.7702 | likely_pathogenic | 0.756 | pathogenic | -2.936 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.534069476 | None | None | N |
V/H | 0.9909 | likely_pathogenic | 0.9923 | pathogenic | -2.67 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/I | 0.0721 | likely_benign | 0.084 | benign | -0.779 | Destabilizing | 0.018 | N | 0.187 | neutral | N | 0.488809256 | None | None | N |
V/K | 0.9887 | likely_pathogenic | 0.9894 | pathogenic | -1.997 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
V/L | 0.2182 | likely_benign | 0.2764 | benign | -0.779 | Destabilizing | 0.333 | N | 0.383 | neutral | D | 0.522865901 | None | None | N |
V/M | 0.2614 | likely_benign | 0.3066 | benign | -1.185 | Destabilizing | 0.995 | D | 0.693 | prob.neutral | None | None | None | None | N |
V/N | 0.9642 | likely_pathogenic | 0.9671 | pathogenic | -2.48 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
V/P | 0.9912 | likely_pathogenic | 0.9934 | pathogenic | -1.287 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/Q | 0.9735 | likely_pathogenic | 0.9718 | pathogenic | -2.27 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
V/R | 0.9758 | likely_pathogenic | 0.9774 | pathogenic | -1.888 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/S | 0.7963 | likely_pathogenic | 0.7885 | pathogenic | -3.164 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/T | 0.6544 | likely_pathogenic | 0.6283 | pathogenic | -2.751 | Highly Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
V/W | 0.9894 | likely_pathogenic | 0.9942 | pathogenic | -2.003 | Highly Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
V/Y | 0.9457 | likely_pathogenic | 0.9652 | pathogenic | -1.681 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.