Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23458 | 70597;70598;70599 | chr2:178575760;178575759;178575758 | chr2:179440487;179440486;179440485 |
N2AB | 21817 | 65674;65675;65676 | chr2:178575760;178575759;178575758 | chr2:179440487;179440486;179440485 |
N2A | 20890 | 62893;62894;62895 | chr2:178575760;178575759;178575758 | chr2:179440487;179440486;179440485 |
N2B | 14393 | 43402;43403;43404 | chr2:178575760;178575759;178575758 | chr2:179440487;179440486;179440485 |
Novex-1 | 14518 | 43777;43778;43779 | chr2:178575760;178575759;178575758 | chr2:179440487;179440486;179440485 |
Novex-2 | 14585 | 43978;43979;43980 | chr2:178575760;178575759;178575758 | chr2:179440487;179440486;179440485 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1709865828 | None | 0.884 | N | 0.503 | 0.199 | 0.51754283126 | gnomAD-4.0.0 | 1.5919E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02572E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2123 | likely_benign | 0.2044 | benign | -1.549 | Destabilizing | 0.543 | D | 0.406 | neutral | None | None | None | None | I |
L/C | 0.5463 | ambiguous | 0.5775 | pathogenic | -0.949 | Destabilizing | 0.996 | D | 0.567 | neutral | None | None | None | None | I |
L/D | 0.7586 | likely_pathogenic | 0.7871 | pathogenic | -1.157 | Destabilizing | 0.59 | D | 0.588 | neutral | None | None | None | None | I |
L/E | 0.4971 | ambiguous | 0.5348 | ambiguous | -1.126 | Destabilizing | 0.009 | N | 0.407 | neutral | None | None | None | None | I |
L/F | 0.1684 | likely_benign | 0.1904 | benign | -1.033 | Destabilizing | 0.884 | D | 0.503 | neutral | N | 0.467956768 | None | None | I |
L/G | 0.5428 | ambiguous | 0.5415 | ambiguous | -1.866 | Destabilizing | 0.742 | D | 0.587 | neutral | None | None | None | None | I |
L/H | 0.2883 | likely_benign | 0.3033 | benign | -0.897 | Destabilizing | 0.983 | D | 0.541 | neutral | N | 0.419221458 | None | None | I |
L/I | 0.0966 | likely_benign | 0.1007 | benign | -0.74 | Destabilizing | 0.012 | N | 0.103 | neutral | N | 0.392477574 | None | None | I |
L/K | 0.4008 | ambiguous | 0.4206 | ambiguous | -1.065 | Destabilizing | 0.59 | D | 0.535 | neutral | None | None | None | None | I |
L/M | 0.0928 | likely_benign | 0.097 | benign | -0.72 | Destabilizing | 0.101 | N | 0.136 | neutral | None | None | None | None | I |
L/N | 0.3409 | ambiguous | 0.3456 | ambiguous | -0.967 | Destabilizing | 0.91 | D | 0.585 | neutral | None | None | None | None | I |
L/P | 0.1684 | likely_benign | 0.1524 | benign | -0.981 | Destabilizing | 0.939 | D | 0.576 | neutral | N | 0.250018453 | None | None | I |
L/Q | 0.2069 | likely_benign | 0.2049 | benign | -1.093 | Destabilizing | 0.835 | D | 0.6 | neutral | None | None | None | None | I |
L/R | 0.3695 | ambiguous | 0.3965 | ambiguous | -0.494 | Destabilizing | 0.884 | D | 0.6 | neutral | N | 0.380009709 | None | None | I |
L/S | 0.2594 | likely_benign | 0.2607 | benign | -1.521 | Destabilizing | 0.742 | D | 0.505 | neutral | None | None | None | None | I |
L/T | 0.1975 | likely_benign | 0.2052 | benign | -1.364 | Destabilizing | 0.742 | D | 0.474 | neutral | None | None | None | None | I |
L/V | 0.0957 | likely_benign | 0.0952 | benign | -0.981 | Destabilizing | 0.164 | N | 0.271 | neutral | N | 0.358095642 | None | None | I |
L/W | 0.4329 | ambiguous | 0.4736 | ambiguous | -1.088 | Destabilizing | 0.996 | D | 0.572 | neutral | None | None | None | None | I |
L/Y | 0.3978 | ambiguous | 0.419 | ambiguous | -0.872 | Destabilizing | 0.953 | D | 0.588 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.