Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23462 | 70609;70610;70611 | chr2:178575748;178575747;178575746 | chr2:179440475;179440474;179440473 |
N2AB | 21821 | 65686;65687;65688 | chr2:178575748;178575747;178575746 | chr2:179440475;179440474;179440473 |
N2A | 20894 | 62905;62906;62907 | chr2:178575748;178575747;178575746 | chr2:179440475;179440474;179440473 |
N2B | 14397 | 43414;43415;43416 | chr2:178575748;178575747;178575746 | chr2:179440475;179440474;179440473 |
Novex-1 | 14522 | 43789;43790;43791 | chr2:178575748;178575747;178575746 | chr2:179440475;179440474;179440473 |
Novex-2 | 14589 | 43990;43991;43992 | chr2:178575748;178575747;178575746 | chr2:179440475;179440474;179440473 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 1.0 | N | 0.685 | 0.399 | 0.502629187243 | gnomAD-4.0.0 | 1.36861E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31895E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.9615 | likely_pathogenic | 0.9762 | pathogenic | -0.526 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.502439188 | None | None | I |
D/C | 0.9933 | likely_pathogenic | 0.9954 | pathogenic | -0.024 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | I |
D/E | 0.892 | likely_pathogenic | 0.9117 | pathogenic | -0.53 | Destabilizing | 0.994 | D | 0.442 | neutral | N | 0.486941825 | None | None | I |
D/F | 0.9947 | likely_pathogenic | 0.9971 | pathogenic | -0.462 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | I |
D/G | 0.9537 | likely_pathogenic | 0.9719 | pathogenic | -0.795 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.506758055 | None | None | I |
D/H | 0.9732 | likely_pathogenic | 0.9829 | pathogenic | -0.742 | Destabilizing | 1.0 | D | 0.651 | neutral | D | 0.52525393 | None | None | I |
D/I | 0.9911 | likely_pathogenic | 0.9951 | pathogenic | 0.157 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
D/K | 0.991 | likely_pathogenic | 0.9938 | pathogenic | -0.006 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
D/L | 0.9854 | likely_pathogenic | 0.9909 | pathogenic | 0.157 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
D/M | 0.9959 | likely_pathogenic | 0.9978 | pathogenic | 0.573 | Stabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
D/N | 0.5579 | ambiguous | 0.6203 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | N | 0.481955076 | None | None | I |
D/P | 0.9919 | likely_pathogenic | 0.9952 | pathogenic | -0.047 | Destabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | I |
D/Q | 0.9839 | likely_pathogenic | 0.9897 | pathogenic | -0.273 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
D/R | 0.9871 | likely_pathogenic | 0.9921 | pathogenic | 0.01 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
D/S | 0.8108 | likely_pathogenic | 0.8753 | pathogenic | -0.506 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
D/T | 0.9404 | likely_pathogenic | 0.961 | pathogenic | -0.287 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
D/V | 0.9767 | likely_pathogenic | 0.9858 | pathogenic | -0.047 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | N | 0.513226062 | None | None | I |
D/W | 0.9986 | likely_pathogenic | 0.9992 | pathogenic | -0.324 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
D/Y | 0.9606 | likely_pathogenic | 0.9761 | pathogenic | -0.229 | Destabilizing | 1.0 | D | 0.631 | neutral | D | 0.552512445 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.