Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23466 | 70621;70622;70623 | chr2:178575736;178575735;178575734 | chr2:179440463;179440462;179440461 |
N2AB | 21825 | 65698;65699;65700 | chr2:178575736;178575735;178575734 | chr2:179440463;179440462;179440461 |
N2A | 20898 | 62917;62918;62919 | chr2:178575736;178575735;178575734 | chr2:179440463;179440462;179440461 |
N2B | 14401 | 43426;43427;43428 | chr2:178575736;178575735;178575734 | chr2:179440463;179440462;179440461 |
Novex-1 | 14526 | 43801;43802;43803 | chr2:178575736;178575735;178575734 | chr2:179440463;179440462;179440461 |
Novex-2 | 14593 | 44002;44003;44004 | chr2:178575736;178575735;178575734 | chr2:179440463;179440462;179440461 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs749744742 | -0.049 | 0.996 | N | 0.443 | 0.4 | 0.34854441366 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | I | None | 4.13E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.56E-05 | 0 |
R/C | rs749744742 | -0.049 | 0.996 | N | 0.443 | 0.4 | 0.34854441366 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 2.42E-05 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/C | rs749744742 | -0.049 | 0.996 | N | 0.443 | 0.4 | 0.34854441366 | gnomAD-4.0.0 | 8.67778E-06 | None | None | None | None | I | None | 1.33618E-05 | 1.66756E-05 | None | 0 | 0 | None | 0 | 0 | 1.01727E-05 | 0 | 0 |
R/G | None | None | 0.579 | N | 0.54 | 0.278 | 0.272639205421 | gnomAD-4.0.0 | 6.84309E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99565E-07 | 0 | 0 |
R/H | rs1193026411 | -0.582 | 0.009 | N | 0.303 | 0.122 | 0.18274738541 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 1.65837E-04 |
R/H | rs1193026411 | -0.582 | 0.009 | N | 0.303 | 0.122 | 0.18274738541 | gnomAD-4.0.0 | 1.0949E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.07949E-05 | 2.31895E-05 | 3.31389E-05 |
R/P | None | None | 0.004 | N | 0.291 | 0.266 | 0.12205267543 | gnomAD-4.0.0 | 6.84315E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99572E-07 | 0 | 0 |
R/S | rs749744742 | None | 0.579 | N | 0.497 | 0.233 | 0.223146558224 | gnomAD-4.0.0 | 1.36862E-06 | None | None | None | None | I | None | 2.98882E-05 | 0 | None | 0 | 0 | None | 0 | 1.73551E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5963 | likely_pathogenic | 0.5881 | pathogenic | 0.04 | Stabilizing | 0.129 | N | 0.481 | neutral | None | None | None | None | I |
R/C | 0.3573 | ambiguous | 0.3555 | ambiguous | -0.207 | Destabilizing | 0.996 | D | 0.443 | neutral | N | 0.472774363 | None | None | I |
R/D | 0.8533 | likely_pathogenic | 0.8295 | pathogenic | -0.254 | Destabilizing | 0.418 | N | 0.555 | neutral | None | None | None | None | I |
R/E | 0.6423 | likely_pathogenic | 0.616 | pathogenic | -0.212 | Destabilizing | 0.228 | N | 0.427 | neutral | None | None | None | None | I |
R/F | 0.8135 | likely_pathogenic | 0.8235 | pathogenic | -0.279 | Destabilizing | 0.716 | D | 0.491 | neutral | None | None | None | None | I |
R/G | 0.5574 | ambiguous | 0.5435 | ambiguous | -0.105 | Destabilizing | 0.579 | D | 0.54 | neutral | N | 0.468167412 | None | None | I |
R/H | 0.183 | likely_benign | 0.1709 | benign | -0.608 | Destabilizing | 0.009 | N | 0.303 | neutral | N | 0.452005881 | None | None | I |
R/I | 0.546 | ambiguous | 0.5716 | pathogenic | 0.376 | Stabilizing | 0.264 | N | 0.551 | neutral | None | None | None | None | I |
R/K | 0.1362 | likely_benign | 0.1287 | benign | -0.126 | Destabilizing | 0.004 | N | 0.129 | neutral | None | None | None | None | I |
R/L | 0.4957 | ambiguous | 0.4898 | ambiguous | 0.376 | Stabilizing | 0.221 | N | 0.529 | neutral | N | 0.483059506 | None | None | I |
R/M | 0.5738 | likely_pathogenic | 0.5878 | pathogenic | -0.041 | Destabilizing | 0.836 | D | 0.489 | neutral | None | None | None | None | I |
R/N | 0.7728 | likely_pathogenic | 0.7658 | pathogenic | -0.011 | Destabilizing | 0.264 | N | 0.437 | neutral | None | None | None | None | I |
R/P | 0.467 | ambiguous | 0.4547 | ambiguous | 0.283 | Stabilizing | 0.004 | N | 0.291 | neutral | N | 0.327327231 | None | None | I |
R/Q | 0.1908 | likely_benign | 0.1831 | benign | -0.062 | Destabilizing | 0.418 | N | 0.466 | neutral | None | None | None | None | I |
R/S | 0.7487 | likely_pathogenic | 0.7329 | pathogenic | -0.218 | Destabilizing | 0.579 | D | 0.497 | neutral | N | 0.459758572 | None | None | I |
R/T | 0.5506 | ambiguous | 0.5436 | ambiguous | -0.066 | Destabilizing | 0.418 | N | 0.505 | neutral | None | None | None | None | I |
R/V | 0.5735 | likely_pathogenic | 0.5782 | pathogenic | 0.283 | Stabilizing | 0.002 | N | 0.29 | neutral | None | None | None | None | I |
R/W | 0.4494 | ambiguous | 0.4504 | ambiguous | -0.449 | Destabilizing | 0.983 | D | 0.463 | neutral | None | None | None | None | I |
R/Y | 0.6501 | likely_pathogenic | 0.6439 | pathogenic | -0.036 | Destabilizing | 0.557 | D | 0.5 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.