Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23480 | 70663;70664;70665 | chr2:178575694;178575693;178575692 | chr2:179440421;179440420;179440419 |
N2AB | 21839 | 65740;65741;65742 | chr2:178575694;178575693;178575692 | chr2:179440421;179440420;179440419 |
N2A | 20912 | 62959;62960;62961 | chr2:178575694;178575693;178575692 | chr2:179440421;179440420;179440419 |
N2B | 14415 | 43468;43469;43470 | chr2:178575694;178575693;178575692 | chr2:179440421;179440420;179440419 |
Novex-1 | 14540 | 43843;43844;43845 | chr2:178575694;178575693;178575692 | chr2:179440421;179440420;179440419 |
Novex-2 | 14607 | 44044;44045;44046 | chr2:178575694;178575693;178575692 | chr2:179440421;179440420;179440419 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.999 | N | 0.65 | 0.252 | 0.291694819147 | gnomAD-4.0.0 | 1.59177E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85907E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9446 | likely_pathogenic | 0.9267 | pathogenic | -0.088 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
K/C | 0.9673 | likely_pathogenic | 0.9582 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
K/D | 0.9869 | likely_pathogenic | 0.9786 | pathogenic | -0.351 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
K/E | 0.9506 | likely_pathogenic | 0.9267 | pathogenic | -0.375 | Destabilizing | 0.998 | D | 0.64 | neutral | N | 0.513224911 | None | None | N |
K/F | 0.9828 | likely_pathogenic | 0.9782 | pathogenic | -0.482 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
K/G | 0.9486 | likely_pathogenic | 0.9307 | pathogenic | -0.18 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | N |
K/H | 0.8161 | likely_pathogenic | 0.7728 | pathogenic | -0.245 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
K/I | 0.9247 | likely_pathogenic | 0.9025 | pathogenic | 0.071 | Stabilizing | 0.995 | D | 0.721 | prob.delet. | N | 0.486194583 | None | None | N |
K/L | 0.8472 | likely_pathogenic | 0.8296 | pathogenic | 0.071 | Stabilizing | 0.996 | D | 0.619 | neutral | None | None | None | None | N |
K/M | 0.8058 | likely_pathogenic | 0.7804 | pathogenic | -0.214 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | N |
K/N | 0.9654 | likely_pathogenic | 0.9509 | pathogenic | -0.15 | Destabilizing | 1.0 | D | 0.662 | neutral | N | 0.50510686 | None | None | N |
K/P | 0.9596 | likely_pathogenic | 0.9397 | pathogenic | 0.039 | Stabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
K/Q | 0.6784 | likely_pathogenic | 0.6103 | pathogenic | -0.289 | Destabilizing | 0.999 | D | 0.65 | neutral | N | 0.4690117 | None | None | N |
K/R | 0.1288 | likely_benign | 0.1208 | benign | -0.231 | Destabilizing | 0.997 | D | 0.585 | neutral | N | 0.4932765 | None | None | N |
K/S | 0.9682 | likely_pathogenic | 0.9563 | pathogenic | -0.509 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
K/T | 0.8899 | likely_pathogenic | 0.8539 | pathogenic | -0.43 | Destabilizing | 1.0 | D | 0.623 | neutral | N | 0.468949248 | None | None | N |
K/V | 0.9058 | likely_pathogenic | 0.8777 | pathogenic | 0.039 | Stabilizing | 0.997 | D | 0.67 | neutral | None | None | None | None | N |
K/W | 0.9775 | likely_pathogenic | 0.9727 | pathogenic | -0.588 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
K/Y | 0.9528 | likely_pathogenic | 0.9408 | pathogenic | -0.249 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.