Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23483 | 70672;70673;70674 | chr2:178575685;178575684;178575683 | chr2:179440412;179440411;179440410 |
N2AB | 21842 | 65749;65750;65751 | chr2:178575685;178575684;178575683 | chr2:179440412;179440411;179440410 |
N2A | 20915 | 62968;62969;62970 | chr2:178575685;178575684;178575683 | chr2:179440412;179440411;179440410 |
N2B | 14418 | 43477;43478;43479 | chr2:178575685;178575684;178575683 | chr2:179440412;179440411;179440410 |
Novex-1 | 14543 | 43852;43853;43854 | chr2:178575685;178575684;178575683 | chr2:179440412;179440411;179440410 |
Novex-2 | 14610 | 44053;44054;44055 | chr2:178575685;178575684;178575683 | chr2:179440412;179440411;179440410 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | 0.932 | N | 0.383 | 0.408 | 0.581503058331 | gnomAD-4.0.0 | 1.59171E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85904E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0721 | likely_benign | 0.0697 | benign | -0.647 | Destabilizing | None | N | 0.115 | neutral | N | 0.449869652 | None | None | N |
S/C | 0.1088 | likely_benign | 0.114 | benign | -0.451 | Destabilizing | 0.932 | D | 0.347 | neutral | N | 0.495259938 | None | None | N |
S/D | 0.8024 | likely_pathogenic | 0.8056 | pathogenic | 0.329 | Stabilizing | 0.405 | N | 0.25 | neutral | None | None | None | None | N |
S/E | 0.8232 | likely_pathogenic | 0.8273 | pathogenic | 0.262 | Stabilizing | 0.488 | N | 0.26 | neutral | None | None | None | None | N |
S/F | 0.2622 | likely_benign | 0.2671 | benign | -1.078 | Destabilizing | 0.932 | D | 0.39 | neutral | N | 0.499298395 | None | None | N |
S/G | 0.1301 | likely_benign | 0.1306 | benign | -0.8 | Destabilizing | 0.207 | N | 0.311 | neutral | None | None | None | None | N |
S/H | 0.535 | ambiguous | 0.5386 | ambiguous | -1.193 | Destabilizing | 0.995 | D | 0.351 | neutral | None | None | None | None | N |
S/I | 0.1629 | likely_benign | 0.1694 | benign | -0.363 | Destabilizing | 0.817 | D | 0.375 | neutral | None | None | None | None | N |
S/K | 0.9015 | likely_pathogenic | 0.906 | pathogenic | -0.533 | Destabilizing | 0.718 | D | 0.263 | neutral | None | None | None | None | N |
S/L | 0.1085 | likely_benign | 0.1075 | benign | -0.363 | Destabilizing | 0.56 | D | 0.3 | neutral | None | None | None | None | N |
S/M | 0.1738 | likely_benign | 0.1673 | benign | -0.138 | Destabilizing | 0.948 | D | 0.353 | neutral | None | None | None | None | N |
S/N | 0.2438 | likely_benign | 0.2414 | benign | -0.319 | Destabilizing | 0.074 | N | 0.354 | neutral | None | None | None | None | N |
S/P | 0.9299 | likely_pathogenic | 0.9137 | pathogenic | -0.427 | Destabilizing | 0.002 | N | 0.203 | neutral | N | 0.48749803 | None | None | N |
S/Q | 0.6327 | likely_pathogenic | 0.6445 | pathogenic | -0.541 | Destabilizing | 0.948 | D | 0.393 | neutral | None | None | None | None | N |
S/R | 0.8701 | likely_pathogenic | 0.8717 | pathogenic | -0.326 | Destabilizing | 0.899 | D | 0.388 | neutral | None | None | None | None | N |
S/T | 0.0694 | likely_benign | 0.0642 | benign | -0.471 | Destabilizing | None | N | 0.117 | neutral | N | 0.423107126 | None | None | N |
S/V | 0.1374 | likely_benign | 0.1393 | benign | -0.427 | Destabilizing | 0.323 | N | 0.295 | neutral | None | None | None | None | N |
S/W | 0.5983 | likely_pathogenic | 0.6205 | pathogenic | -1.014 | Destabilizing | 0.995 | D | 0.468 | neutral | None | None | None | None | N |
S/Y | 0.342 | ambiguous | 0.3551 | ambiguous | -0.767 | Destabilizing | 0.932 | D | 0.383 | neutral | N | 0.519308308 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.