Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23485 | 70678;70679;70680 | chr2:178575679;178575678;178575677 | chr2:179440406;179440405;179440404 |
N2AB | 21844 | 65755;65756;65757 | chr2:178575679;178575678;178575677 | chr2:179440406;179440405;179440404 |
N2A | 20917 | 62974;62975;62976 | chr2:178575679;178575678;178575677 | chr2:179440406;179440405;179440404 |
N2B | 14420 | 43483;43484;43485 | chr2:178575679;178575678;178575677 | chr2:179440406;179440405;179440404 |
Novex-1 | 14545 | 43858;43859;43860 | chr2:178575679;178575678;178575677 | chr2:179440406;179440405;179440404 |
Novex-2 | 14612 | 44059;44060;44061 | chr2:178575679;178575678;178575677 | chr2:179440406;179440405;179440404 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 0.295 | N | 0.527 | 0.148 | 0.117506650769 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3497 | ambiguous | 0.3584 | ambiguous | -1.0 | Destabilizing | 0.356 | N | 0.553 | neutral | None | None | None | None | N |
A/D | 0.6558 | likely_pathogenic | 0.7047 | pathogenic | -0.857 | Destabilizing | 0.295 | N | 0.527 | neutral | N | 0.492391066 | None | None | N |
A/E | 0.4768 | ambiguous | 0.529 | ambiguous | -0.893 | Destabilizing | 0.136 | N | 0.495 | neutral | None | None | None | None | N |
A/F | 0.2889 | likely_benign | 0.2979 | benign | -1.076 | Destabilizing | 0.072 | N | 0.521 | neutral | None | None | None | None | N |
A/G | 0.2525 | likely_benign | 0.2574 | benign | -1.14 | Destabilizing | 0.106 | N | 0.421 | neutral | N | 0.492564424 | None | None | N |
A/H | 0.672 | likely_pathogenic | 0.6972 | pathogenic | -1.27 | Destabilizing | 0.864 | D | 0.525 | neutral | None | None | None | None | N |
A/I | 0.0789 | likely_benign | 0.0798 | benign | -0.385 | Destabilizing | None | N | 0.261 | neutral | None | None | None | None | N |
A/K | 0.744 | likely_pathogenic | 0.7902 | pathogenic | -1.061 | Destabilizing | 0.136 | N | 0.498 | neutral | None | None | None | None | N |
A/L | 0.1065 | likely_benign | 0.1059 | benign | -0.385 | Destabilizing | None | N | 0.249 | neutral | None | None | None | None | N |
A/M | 0.1275 | likely_benign | 0.1247 | benign | -0.389 | Destabilizing | 0.214 | N | 0.524 | neutral | None | None | None | None | N |
A/N | 0.4303 | ambiguous | 0.4631 | ambiguous | -0.819 | Destabilizing | 0.628 | D | 0.524 | neutral | None | None | None | None | N |
A/P | 0.7662 | likely_pathogenic | 0.7707 | pathogenic | -0.513 | Destabilizing | 0.295 | N | 0.536 | neutral | N | 0.517596154 | None | None | N |
A/Q | 0.507 | ambiguous | 0.5458 | ambiguous | -0.965 | Destabilizing | 0.628 | D | 0.523 | neutral | None | None | None | None | N |
A/R | 0.7106 | likely_pathogenic | 0.7535 | pathogenic | -0.755 | Destabilizing | 0.356 | N | 0.525 | neutral | None | None | None | None | N |
A/S | 0.1186 | likely_benign | 0.1222 | benign | -1.212 | Destabilizing | 0.055 | N | 0.437 | neutral | N | 0.48271279 | None | None | N |
A/T | 0.0893 | likely_benign | 0.0863 | benign | -1.141 | Destabilizing | 0.012 | N | 0.409 | neutral | N | 0.476325535 | None | None | N |
A/V | 0.0504 | likely_benign | 0.0514 | benign | -0.513 | Destabilizing | None | N | 0.163 | neutral | N | 0.303530438 | None | None | N |
A/W | 0.8563 | likely_pathogenic | 0.8607 | pathogenic | -1.371 | Destabilizing | 0.864 | D | 0.585 | neutral | None | None | None | None | N |
A/Y | 0.5703 | likely_pathogenic | 0.5867 | pathogenic | -0.959 | Destabilizing | 0.356 | N | 0.517 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.