Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23486 | 70681;70682;70683 | chr2:178575676;178575675;178575674 | chr2:179440403;179440402;179440401 |
N2AB | 21845 | 65758;65759;65760 | chr2:178575676;178575675;178575674 | chr2:179440403;179440402;179440401 |
N2A | 20918 | 62977;62978;62979 | chr2:178575676;178575675;178575674 | chr2:179440403;179440402;179440401 |
N2B | 14421 | 43486;43487;43488 | chr2:178575676;178575675;178575674 | chr2:179440403;179440402;179440401 |
Novex-1 | 14546 | 43861;43862;43863 | chr2:178575676;178575675;178575674 | chr2:179440403;179440402;179440401 |
Novex-2 | 14613 | 44062;44063;44064 | chr2:178575676;178575675;178575674 | chr2:179440403;179440402;179440401 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs774575929 | -0.084 | 0.497 | N | 0.621 | 0.163 | 0.319114376414 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
T/I | rs774575929 | -0.084 | 0.497 | N | 0.621 | 0.163 | 0.319114376414 | gnomAD-4.0.0 | 2.05284E-06 | None | None | None | None | N | None | 0 | 2.23634E-05 | None | 0 | 5.04566E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0784 | likely_benign | 0.0757 | benign | -1.004 | Destabilizing | 0.055 | N | 0.453 | neutral | N | 0.475424245 | None | None | N |
T/C | 0.4515 | ambiguous | 0.4257 | ambiguous | -0.531 | Destabilizing | 0.909 | D | 0.617 | neutral | None | None | None | None | N |
T/D | 0.5234 | ambiguous | 0.5072 | ambiguous | -0.126 | Destabilizing | 0.157 | N | 0.555 | neutral | None | None | None | None | N |
T/E | 0.5869 | likely_pathogenic | 0.5873 | pathogenic | -0.085 | Destabilizing | 0.157 | N | 0.548 | neutral | None | None | None | None | N |
T/F | 0.4157 | ambiguous | 0.4478 | ambiguous | -1.03 | Destabilizing | 0.726 | D | 0.678 | prob.neutral | None | None | None | None | N |
T/G | 0.298 | likely_benign | 0.2696 | benign | -1.299 | Destabilizing | 0.157 | N | 0.577 | neutral | None | None | None | None | N |
T/H | 0.5135 | ambiguous | 0.5106 | ambiguous | -1.504 | Destabilizing | 0.909 | D | 0.679 | prob.neutral | None | None | None | None | N |
T/I | 0.2721 | likely_benign | 0.2955 | benign | -0.297 | Destabilizing | 0.497 | N | 0.621 | neutral | N | 0.510998256 | None | None | N |
T/K | 0.6432 | likely_pathogenic | 0.629 | pathogenic | -0.669 | Destabilizing | 0.157 | N | 0.556 | neutral | None | None | None | None | N |
T/L | 0.1721 | likely_benign | 0.1748 | benign | -0.297 | Destabilizing | 0.272 | N | 0.551 | neutral | None | None | None | None | N |
T/M | 0.125 | likely_benign | 0.1334 | benign | -0.059 | Destabilizing | 0.968 | D | 0.615 | neutral | None | None | None | None | N |
T/N | 0.1957 | likely_benign | 0.194 | benign | -0.734 | Destabilizing | 0.331 | N | 0.569 | neutral | N | 0.462222874 | None | None | N |
T/P | 0.7639 | likely_pathogenic | 0.7529 | pathogenic | -0.5 | Destabilizing | 0.001 | N | 0.3 | neutral | N | 0.478627394 | None | None | N |
T/Q | 0.4805 | ambiguous | 0.4723 | ambiguous | -0.785 | Destabilizing | 0.567 | D | 0.625 | neutral | None | None | None | None | N |
T/R | 0.5816 | likely_pathogenic | 0.5704 | pathogenic | -0.536 | Destabilizing | 0.567 | D | 0.625 | neutral | None | None | None | None | N |
T/S | 0.1096 | likely_benign | 0.1006 | benign | -1.059 | Destabilizing | 0.001 | N | 0.215 | neutral | N | 0.447677496 | None | None | N |
T/V | 0.1675 | likely_benign | 0.1779 | benign | -0.5 | Destabilizing | 0.272 | N | 0.527 | neutral | None | None | None | None | N |
T/W | 0.8666 | likely_pathogenic | 0.8758 | pathogenic | -0.976 | Destabilizing | 0.968 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/Y | 0.5766 | likely_pathogenic | 0.5854 | pathogenic | -0.728 | Destabilizing | 0.726 | D | 0.68 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.