Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23487 | 70684;70685;70686 | chr2:178575673;178575672;178575671 | chr2:179440400;179440399;179440398 |
N2AB | 21846 | 65761;65762;65763 | chr2:178575673;178575672;178575671 | chr2:179440400;179440399;179440398 |
N2A | 20919 | 62980;62981;62982 | chr2:178575673;178575672;178575671 | chr2:179440400;179440399;179440398 |
N2B | 14422 | 43489;43490;43491 | chr2:178575673;178575672;178575671 | chr2:179440400;179440399;179440398 |
Novex-1 | 14547 | 43864;43865;43866 | chr2:178575673;178575672;178575671 | chr2:179440400;179440399;179440398 |
Novex-2 | 14614 | 44065;44066;44067 | chr2:178575673;178575672;178575671 | chr2:179440400;179440399;179440398 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.983 | N | 0.76 | 0.355 | 0.39162414616 | gnomAD-4.0.0 | 2.73715E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69865E-06 | 1.15947E-05 | 0 |
T/S | None | None | 0.008 | N | 0.307 | 0.124 | 0.124217242631 | gnomAD-4.0.0 | 6.84287E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99549E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0983 | likely_benign | 0.0834 | benign | -0.675 | Destabilizing | 0.106 | N | 0.453 | neutral | N | 0.482923433 | None | None | N |
T/C | 0.6407 | likely_pathogenic | 0.5436 | ambiguous | -0.342 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/D | 0.601 | likely_pathogenic | 0.5225 | ambiguous | -0.131 | Destabilizing | 0.892 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/E | 0.5342 | ambiguous | 0.4707 | ambiguous | -0.186 | Destabilizing | 0.965 | D | 0.688 | prob.neutral | None | None | None | None | N |
T/F | 0.5267 | ambiguous | 0.4343 | ambiguous | -0.986 | Destabilizing | 0.995 | D | 0.785 | deleterious | None | None | None | None | N |
T/G | 0.2847 | likely_benign | 0.2107 | benign | -0.857 | Destabilizing | 0.908 | D | 0.623 | neutral | None | None | None | None | N |
T/H | 0.4898 | ambiguous | 0.4048 | ambiguous | -1.203 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
T/I | 0.383 | ambiguous | 0.3334 | benign | -0.296 | Destabilizing | 0.983 | D | 0.76 | deleterious | N | 0.468162326 | None | None | N |
T/K | 0.4846 | ambiguous | 0.4432 | ambiguous | -0.597 | Destabilizing | 0.975 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/L | 0.1581 | likely_benign | 0.1299 | benign | -0.296 | Destabilizing | 0.917 | D | 0.622 | neutral | None | None | None | None | N |
T/M | 0.1342 | likely_benign | 0.1233 | benign | 0.091 | Stabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | N |
T/N | 0.1882 | likely_benign | 0.1465 | benign | -0.374 | Destabilizing | 0.862 | D | 0.678 | prob.neutral | N | 0.486387813 | None | None | N |
T/P | 0.1747 | likely_benign | 0.135 | benign | -0.392 | Destabilizing | 0.927 | D | 0.758 | deleterious | N | 0.46883757 | None | None | N |
T/Q | 0.3836 | ambiguous | 0.3277 | benign | -0.662 | Destabilizing | 0.947 | D | 0.763 | deleterious | None | None | None | None | N |
T/R | 0.414 | ambiguous | 0.379 | ambiguous | -0.285 | Destabilizing | 0.99 | D | 0.761 | deleterious | None | None | None | None | N |
T/S | 0.1392 | likely_benign | 0.1116 | benign | -0.627 | Destabilizing | 0.008 | N | 0.307 | neutral | N | 0.448216214 | None | None | N |
T/V | 0.2113 | likely_benign | 0.1848 | benign | -0.392 | Destabilizing | 0.887 | D | 0.586 | neutral | None | None | None | None | N |
T/W | 0.8317 | likely_pathogenic | 0.7662 | pathogenic | -0.904 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
T/Y | 0.5769 | likely_pathogenic | 0.4835 | ambiguous | -0.67 | Destabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.