Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23488 | 70687;70688;70689 | chr2:178575670;178575669;178575668 | chr2:179440397;179440396;179440395 |
N2AB | 21847 | 65764;65765;65766 | chr2:178575670;178575669;178575668 | chr2:179440397;179440396;179440395 |
N2A | 20920 | 62983;62984;62985 | chr2:178575670;178575669;178575668 | chr2:179440397;179440396;179440395 |
N2B | 14423 | 43492;43493;43494 | chr2:178575670;178575669;178575668 | chr2:179440397;179440396;179440395 |
Novex-1 | 14548 | 43867;43868;43869 | chr2:178575670;178575669;178575668 | chr2:179440397;179440396;179440395 |
Novex-2 | 14615 | 44068;44069;44070 | chr2:178575670;178575669;178575668 | chr2:179440397;179440396;179440395 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.166 | N | 0.132 | 0.215 | 0.197625483188 | gnomAD-4.0.0 | 1.36858E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7991E-06 | 0 | 0 |
K/R | None | None | 0.166 | N | 0.162 | 0.106 | 0.166414681773 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.253 | likely_benign | 0.2694 | benign | 0.109 | Stabilizing | 0.007 | N | 0.117 | neutral | None | None | None | None | N |
K/C | 0.6132 | likely_pathogenic | 0.6112 | pathogenic | 0.186 | Stabilizing | 0.965 | D | 0.242 | neutral | None | None | None | None | N |
K/D | 0.4141 | ambiguous | 0.4272 | ambiguous | -0.026 | Destabilizing | 0.209 | N | 0.223 | neutral | None | None | None | None | N |
K/E | 0.1988 | likely_benign | 0.2206 | benign | -0.027 | Destabilizing | 0.166 | N | 0.132 | neutral | N | 0.445349267 | None | None | N |
K/F | 0.7742 | likely_pathogenic | 0.8024 | pathogenic | -0.092 | Destabilizing | 0.965 | D | 0.293 | neutral | None | None | None | None | N |
K/G | 0.3594 | ambiguous | 0.3645 | ambiguous | -0.082 | Destabilizing | 0.103 | N | 0.211 | neutral | None | None | None | None | N |
K/H | 0.2411 | likely_benign | 0.2487 | benign | -0.37 | Destabilizing | 0.901 | D | 0.259 | neutral | None | None | None | None | N |
K/I | 0.4142 | ambiguous | 0.4691 | ambiguous | 0.54 | Stabilizing | 0.561 | D | 0.361 | neutral | None | None | None | None | N |
K/L | 0.3825 | ambiguous | 0.4207 | ambiguous | 0.54 | Stabilizing | 0.345 | N | 0.203 | neutral | None | None | None | None | N |
K/M | 0.2762 | likely_benign | 0.3125 | benign | 0.324 | Stabilizing | 0.873 | D | 0.257 | neutral | N | 0.483765501 | None | None | N |
K/N | 0.2689 | likely_benign | 0.3016 | benign | 0.584 | Stabilizing | 0.001 | N | 0.157 | neutral | N | 0.425648785 | None | None | N |
K/P | 0.8299 | likely_pathogenic | 0.8363 | pathogenic | 0.423 | Stabilizing | 0.722 | D | 0.275 | neutral | None | None | None | None | N |
K/Q | 0.1246 | likely_benign | 0.1313 | benign | 0.401 | Stabilizing | 0.013 | N | 0.163 | neutral | N | 0.491276345 | None | None | N |
K/R | 0.0824 | likely_benign | 0.081 | benign | 0.159 | Stabilizing | 0.166 | N | 0.162 | neutral | N | 0.494065934 | None | None | N |
K/S | 0.2794 | likely_benign | 0.2969 | benign | 0.184 | Stabilizing | 0.021 | N | 0.147 | neutral | None | None | None | None | N |
K/T | 0.1418 | likely_benign | 0.1606 | benign | 0.316 | Stabilizing | 0.002 | N | 0.105 | neutral | N | 0.451179161 | None | None | N |
K/V | 0.3117 | likely_benign | 0.3465 | ambiguous | 0.423 | Stabilizing | 0.345 | N | 0.21 | neutral | None | None | None | None | N |
K/W | 0.7889 | likely_pathogenic | 0.8085 | pathogenic | -0.149 | Destabilizing | 0.991 | D | 0.237 | neutral | None | None | None | None | N |
K/Y | 0.5781 | likely_pathogenic | 0.6153 | pathogenic | 0.194 | Stabilizing | 0.965 | D | 0.315 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.