Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23490 | 70693;70694;70695 | chr2:178575664;178575663;178575662 | chr2:179440391;179440390;179440389 |
N2AB | 21849 | 65770;65771;65772 | chr2:178575664;178575663;178575662 | chr2:179440391;179440390;179440389 |
N2A | 20922 | 62989;62990;62991 | chr2:178575664;178575663;178575662 | chr2:179440391;179440390;179440389 |
N2B | 14425 | 43498;43499;43500 | chr2:178575664;178575663;178575662 | chr2:179440391;179440390;179440389 |
Novex-1 | 14550 | 43873;43874;43875 | chr2:178575664;178575663;178575662 | chr2:179440391;179440390;179440389 |
Novex-2 | 14617 | 44074;44075;44076 | chr2:178575664;178575663;178575662 | chr2:179440391;179440390;179440389 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | rs1397554911 | None | 0.255 | N | 0.209 | 0.218 | 0.154104182512 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/D | rs1397554911 | None | 0.255 | N | 0.209 | 0.218 | 0.154104182512 | gnomAD-4.0.0 | 3.84475E-06 | None | None | None | None | N | None | 1.69291E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39383E-06 | 0 | 2.84511E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1627 | likely_benign | 0.1687 | benign | 0.487 | Stabilizing | 0.248 | N | 0.199 | neutral | None | None | None | None | N |
H/C | 0.167 | likely_benign | 0.1583 | benign | 0.889 | Stabilizing | 0.989 | D | 0.217 | neutral | None | None | None | None | N |
H/D | 0.2254 | likely_benign | 0.2104 | benign | 0.143 | Stabilizing | 0.255 | N | 0.209 | neutral | N | 0.461836085 | None | None | N |
H/E | 0.2725 | likely_benign | 0.2649 | benign | 0.153 | Stabilizing | 0.12 | N | 0.097 | neutral | None | None | None | None | N |
H/F | 0.2527 | likely_benign | 0.2658 | benign | 1.0 | Stabilizing | 0.978 | D | 0.333 | neutral | None | None | None | None | N |
H/G | 0.1799 | likely_benign | 0.1762 | benign | 0.227 | Stabilizing | 0.43 | N | 0.206 | neutral | None | None | None | None | N |
H/I | 0.2278 | likely_benign | 0.2395 | benign | 1.135 | Stabilizing | 0.747 | D | 0.306 | neutral | None | None | None | None | N |
H/K | 0.2761 | likely_benign | 0.2461 | benign | 0.469 | Stabilizing | 0.231 | N | 0.206 | neutral | None | None | None | None | N |
H/L | 0.0868 | likely_benign | 0.0908 | benign | 1.135 | Stabilizing | 0.312 | N | 0.239 | neutral | N | 0.483675582 | None | None | N |
H/M | 0.2992 | likely_benign | 0.3237 | benign | 0.901 | Stabilizing | 0.912 | D | 0.246 | neutral | None | None | None | None | N |
H/N | 0.0708 | likely_benign | 0.0719 | benign | 0.522 | Stabilizing | 0.255 | N | 0.153 | neutral | N | 0.397747321 | None | None | N |
H/P | 0.0702 | likely_benign | 0.0692 | benign | 0.945 | Stabilizing | 0.627 | D | 0.285 | neutral | N | 0.422048333 | None | None | N |
H/Q | 0.124 | likely_benign | 0.1243 | benign | 0.586 | Stabilizing | 0.002 | N | 0.106 | neutral | N | 0.453832677 | None | None | N |
H/R | 0.1513 | likely_benign | 0.1274 | benign | -0.089 | Destabilizing | 0.185 | N | 0.14 | neutral | N | 0.421202971 | None | None | N |
H/S | 0.1089 | likely_benign | 0.111 | benign | 0.611 | Stabilizing | 0.02 | N | 0.123 | neutral | None | None | None | None | N |
H/T | 0.1414 | likely_benign | 0.1438 | benign | 0.717 | Stabilizing | 0.185 | N | 0.211 | neutral | None | None | None | None | N |
H/V | 0.1806 | likely_benign | 0.1911 | benign | 0.945 | Stabilizing | 0.603 | D | 0.272 | neutral | None | None | None | None | N |
H/W | 0.3897 | ambiguous | 0.387 | ambiguous | 0.928 | Stabilizing | 0.998 | D | 0.221 | neutral | None | None | None | None | N |
H/Y | 0.1099 | likely_benign | 0.11 | benign | 1.257 | Stabilizing | 0.905 | D | 0.192 | neutral | N | 0.492564424 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.