Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23494 | 70705;70706;70707 | chr2:178575652;178575651;178575650 | chr2:179440379;179440378;179440377 |
N2AB | 21853 | 65782;65783;65784 | chr2:178575652;178575651;178575650 | chr2:179440379;179440378;179440377 |
N2A | 20926 | 63001;63002;63003 | chr2:178575652;178575651;178575650 | chr2:179440379;179440378;179440377 |
N2B | 14429 | 43510;43511;43512 | chr2:178575652;178575651;178575650 | chr2:179440379;179440378;179440377 |
Novex-1 | 14554 | 43885;43886;43887 | chr2:178575652;178575651;178575650 | chr2:179440379;179440378;179440377 |
Novex-2 | 14621 | 44086;44087;44088 | chr2:178575652;178575651;178575650 | chr2:179440379;179440378;179440377 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs72646888 | None | 0.741 | N | 0.539 | 0.291 | 0.384752662912 | gnomAD-4.0.0 | 6.84286E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09597E-06 | 0 | 1.65684E-05 |
Y/N | None | None | 0.484 | N | 0.615 | 0.429 | 0.683845495215 | gnomAD-4.0.0 | 6.84286E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99552E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.4748 | ambiguous | 0.5548 | ambiguous | -2.082 | Highly Destabilizing | 0.035 | N | 0.536 | neutral | None | None | None | None | N |
Y/C | 0.1114 | likely_benign | 0.1264 | benign | -0.949 | Destabilizing | 0.001 | N | 0.512 | neutral | N | 0.469461065 | None | None | N |
Y/D | 0.7847 | likely_pathogenic | 0.8519 | pathogenic | -1.008 | Destabilizing | 0.741 | D | 0.643 | neutral | D | 0.525181933 | None | None | N |
Y/E | 0.8459 | likely_pathogenic | 0.8988 | pathogenic | -0.895 | Destabilizing | 0.791 | D | 0.633 | neutral | None | None | None | None | N |
Y/F | 0.0621 | likely_benign | 0.065 | benign | -0.677 | Destabilizing | None | N | 0.167 | neutral | N | 0.430998677 | None | None | N |
Y/G | 0.5853 | likely_pathogenic | 0.6574 | pathogenic | -2.423 | Highly Destabilizing | 0.149 | N | 0.613 | neutral | None | None | None | None | N |
Y/H | 0.2608 | likely_benign | 0.3034 | benign | -0.886 | Destabilizing | 0.741 | D | 0.539 | neutral | N | 0.474539244 | None | None | N |
Y/I | 0.3869 | ambiguous | 0.4871 | ambiguous | -1.037 | Destabilizing | 0.081 | N | 0.519 | neutral | None | None | None | None | N |
Y/K | 0.8542 | likely_pathogenic | 0.8976 | pathogenic | -1.245 | Destabilizing | 0.555 | D | 0.632 | neutral | None | None | None | None | N |
Y/L | 0.3839 | ambiguous | 0.4453 | ambiguous | -1.037 | Destabilizing | None | N | 0.303 | neutral | None | None | None | None | N |
Y/M | 0.4911 | ambiguous | 0.5655 | pathogenic | -0.782 | Destabilizing | 0.38 | N | 0.566 | neutral | None | None | None | None | N |
Y/N | 0.4723 | ambiguous | 0.5868 | pathogenic | -1.712 | Destabilizing | 0.484 | N | 0.615 | neutral | N | 0.513572138 | None | None | N |
Y/P | 0.9838 | likely_pathogenic | 0.9889 | pathogenic | -1.382 | Destabilizing | 0.791 | D | 0.635 | neutral | None | None | None | None | N |
Y/Q | 0.6565 | likely_pathogenic | 0.7383 | pathogenic | -1.55 | Destabilizing | 0.791 | D | 0.556 | neutral | None | None | None | None | N |
Y/R | 0.732 | likely_pathogenic | 0.7848 | pathogenic | -0.934 | Destabilizing | 0.555 | D | 0.619 | neutral | None | None | None | None | N |
Y/S | 0.3328 | likely_benign | 0.4148 | ambiguous | -2.188 | Highly Destabilizing | 0.117 | N | 0.59 | neutral | N | 0.492581047 | None | None | N |
Y/T | 0.5324 | ambiguous | 0.6454 | pathogenic | -1.972 | Destabilizing | 0.149 | N | 0.597 | neutral | None | None | None | None | N |
Y/V | 0.2926 | likely_benign | 0.3649 | ambiguous | -1.382 | Destabilizing | 0.035 | N | 0.488 | neutral | None | None | None | None | N |
Y/W | 0.296 | likely_benign | 0.2979 | benign | -0.28 | Destabilizing | 0.791 | D | 0.551 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.