Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23496 | 70711;70712;70713 | chr2:178575646;178575645;178575644 | chr2:179440373;179440372;179440371 |
N2AB | 21855 | 65788;65789;65790 | chr2:178575646;178575645;178575644 | chr2:179440373;179440372;179440371 |
N2A | 20928 | 63007;63008;63009 | chr2:178575646;178575645;178575644 | chr2:179440373;179440372;179440371 |
N2B | 14431 | 43516;43517;43518 | chr2:178575646;178575645;178575644 | chr2:179440373;179440372;179440371 |
Novex-1 | 14556 | 43891;43892;43893 | chr2:178575646;178575645;178575644 | chr2:179440373;179440372;179440371 |
Novex-2 | 14623 | 44092;44093;44094 | chr2:178575646;178575645;178575644 | chr2:179440373;179440372;179440371 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.244 | N | 0.532 | 0.126 | 0.413891365518 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.663 | likely_pathogenic | 0.6918 | pathogenic | -1.815 | Destabilizing | 0.027 | N | 0.402 | neutral | N | 0.490672171 | None | None | N |
V/C | 0.8911 | likely_pathogenic | 0.918 | pathogenic | -1.438 | Destabilizing | 0.997 | D | 0.807 | deleterious | None | None | None | None | N |
V/D | 0.9776 | likely_pathogenic | 0.987 | pathogenic | -2.062 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | N | 0.511245188 | None | None | N |
V/E | 0.9411 | likely_pathogenic | 0.9615 | pathogenic | -1.814 | Destabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | N |
V/F | 0.4035 | ambiguous | 0.4911 | ambiguous | -1.051 | Destabilizing | 0.237 | N | 0.591 | neutral | N | 0.498986602 | None | None | N |
V/G | 0.8583 | likely_pathogenic | 0.8873 | pathogenic | -2.386 | Highly Destabilizing | 0.937 | D | 0.787 | deleterious | D | 0.546239157 | None | None | N |
V/H | 0.9751 | likely_pathogenic | 0.9865 | pathogenic | -2.144 | Highly Destabilizing | 0.999 | D | 0.85 | deleterious | None | None | None | None | N |
V/I | 0.0668 | likely_benign | 0.067 | benign | -0.221 | Destabilizing | None | N | 0.197 | neutral | N | 0.439964877 | None | None | N |
V/K | 0.9699 | likely_pathogenic | 0.9829 | pathogenic | -1.463 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
V/L | 0.2099 | likely_benign | 0.2456 | benign | -0.221 | Destabilizing | 0.244 | N | 0.532 | neutral | N | 0.467695027 | None | None | N |
V/M | 0.267 | likely_benign | 0.3207 | benign | -0.353 | Destabilizing | 0.993 | D | 0.649 | neutral | None | None | None | None | N |
V/N | 0.9361 | likely_pathogenic | 0.963 | pathogenic | -1.829 | Destabilizing | 0.997 | D | 0.849 | deleterious | None | None | None | None | N |
V/P | 0.9689 | likely_pathogenic | 0.9789 | pathogenic | -0.724 | Destabilizing | 0.997 | D | 0.84 | deleterious | None | None | None | None | N |
V/Q | 0.9435 | likely_pathogenic | 0.9669 | pathogenic | -1.59 | Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
V/R | 0.9602 | likely_pathogenic | 0.9772 | pathogenic | -1.469 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
V/S | 0.8881 | likely_pathogenic | 0.9204 | pathogenic | -2.518 | Highly Destabilizing | 0.856 | D | 0.789 | deleterious | None | None | None | None | N |
V/T | 0.7993 | likely_pathogenic | 0.8397 | pathogenic | -2.098 | Highly Destabilizing | 0.828 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/W | 0.9709 | likely_pathogenic | 0.9827 | pathogenic | -1.521 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
V/Y | 0.8823 | likely_pathogenic | 0.9241 | pathogenic | -1.094 | Destabilizing | 0.975 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.