Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23499 | 70720;70721;70722 | chr2:178575637;178575636;178575635 | chr2:179440364;179440363;179440362 |
N2AB | 21858 | 65797;65798;65799 | chr2:178575637;178575636;178575635 | chr2:179440364;179440363;179440362 |
N2A | 20931 | 63016;63017;63018 | chr2:178575637;178575636;178575635 | chr2:179440364;179440363;179440362 |
N2B | 14434 | 43525;43526;43527 | chr2:178575637;178575636;178575635 | chr2:179440364;179440363;179440362 |
Novex-1 | 14559 | 43900;43901;43902 | chr2:178575637;178575636;178575635 | chr2:179440364;179440363;179440362 |
Novex-2 | 14626 | 44101;44102;44103 | chr2:178575637;178575636;178575635 | chr2:179440364;179440363;179440362 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs75626265 | -2.286 | 1.0 | D | 0.855 | 0.645 | 0.850636553644 | gnomAD-4.0.0 | 6.37414E-05 | None | None | None | None | N | None | 5.65803E-05 | 0 | None | 0 | 3.06407E-04 | None | 4.93246E-04 | 0 | 0 | 0 | 6.06428E-05 |
L/S | None | None | 1.0 | D | 0.826 | 0.768 | 0.901367598863 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9638 | likely_pathogenic | 0.9721 | pathogenic | -2.432 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/C | 0.9372 | likely_pathogenic | 0.9554 | pathogenic | -2.249 | Highly Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
L/D | 0.9992 | likely_pathogenic | 0.9994 | pathogenic | -1.722 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/E | 0.9968 | likely_pathogenic | 0.9976 | pathogenic | -1.637 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
L/F | 0.7595 | likely_pathogenic | 0.7924 | pathogenic | -1.898 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.649885539 | None | None | N |
L/G | 0.9923 | likely_pathogenic | 0.9933 | pathogenic | -2.839 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/H | 0.9906 | likely_pathogenic | 0.9921 | pathogenic | -1.958 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
L/I | 0.2574 | likely_benign | 0.3279 | benign | -1.326 | Destabilizing | 0.996 | D | 0.827 | deleterious | None | None | None | None | N |
L/K | 0.9931 | likely_pathogenic | 0.994 | pathogenic | -1.721 | Destabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | N |
L/M | 0.4407 | ambiguous | 0.4863 | ambiguous | -1.279 | Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.640366789 | None | None | N |
L/N | 0.9924 | likely_pathogenic | 0.9939 | pathogenic | -1.74 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
L/P | 0.992 | likely_pathogenic | 0.9937 | pathogenic | -1.669 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/Q | 0.9842 | likely_pathogenic | 0.9875 | pathogenic | -1.839 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
L/R | 0.9864 | likely_pathogenic | 0.9878 | pathogenic | -1.161 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
L/S | 0.993 | likely_pathogenic | 0.995 | pathogenic | -2.577 | Highly Destabilizing | 1.0 | D | 0.826 | deleterious | D | 0.682963643 | None | None | N |
L/T | 0.9592 | likely_pathogenic | 0.9697 | pathogenic | -2.346 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/V | 0.3501 | ambiguous | 0.4374 | ambiguous | -1.669 | Destabilizing | 0.996 | D | 0.837 | deleterious | D | 0.614626873 | None | None | N |
L/W | 0.9792 | likely_pathogenic | 0.9833 | pathogenic | -1.912 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.682963643 | None | None | N |
L/Y | 0.9814 | likely_pathogenic | 0.9853 | pathogenic | -1.71 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.