Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23501 | 70726;70727;70728 | chr2:178575631;178575630;178575629 | chr2:179440358;179440357;179440356 |
N2AB | 21860 | 65803;65804;65805 | chr2:178575631;178575630;178575629 | chr2:179440358;179440357;179440356 |
N2A | 20933 | 63022;63023;63024 | chr2:178575631;178575630;178575629 | chr2:179440358;179440357;179440356 |
N2B | 14436 | 43531;43532;43533 | chr2:178575631;178575630;178575629 | chr2:179440358;179440357;179440356 |
Novex-1 | 14561 | 43906;43907;43908 | chr2:178575631;178575630;178575629 | chr2:179440358;179440357;179440356 |
Novex-2 | 14628 | 44107;44108;44109 | chr2:178575631;178575630;178575629 | chr2:179440358;179440357;179440356 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1709809170 | None | 0.997 | N | 0.71 | 0.361 | 0.48087575253 | gnomAD-4.0.0 | 4.77544E-06 | None | None | None | None | N | None | 0 | 2.28655E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86615E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2605 | likely_benign | 0.291 | benign | -0.204 | Destabilizing | 0.995 | D | 0.647 | neutral | N | 0.517209365 | None | None | N |
E/C | 0.9534 | likely_pathogenic | 0.9653 | pathogenic | 0.247 | Stabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
E/D | 0.5737 | likely_pathogenic | 0.5325 | ambiguous | -0.208 | Destabilizing | 0.965 | D | 0.603 | neutral | N | 0.504414197 | None | None | N |
E/F | 0.9697 | likely_pathogenic | 0.9763 | pathogenic | -0.31 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
E/G | 0.5086 | ambiguous | 0.5549 | ambiguous | -0.363 | Destabilizing | 1.0 | D | 0.6 | neutral | N | 0.510263547 | None | None | N |
E/H | 0.8794 | likely_pathogenic | 0.9021 | pathogenic | -0.133 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | N |
E/I | 0.6899 | likely_pathogenic | 0.7366 | pathogenic | 0.166 | Stabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
E/K | 0.4001 | ambiguous | 0.4763 | ambiguous | 0.569 | Stabilizing | 0.997 | D | 0.71 | prob.delet. | N | 0.474598015 | None | None | N |
E/L | 0.803 | likely_pathogenic | 0.849 | pathogenic | 0.166 | Stabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
E/M | 0.7806 | likely_pathogenic | 0.8179 | pathogenic | 0.322 | Stabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | N |
E/N | 0.7557 | likely_pathogenic | 0.7622 | pathogenic | 0.388 | Stabilizing | 0.998 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/P | 0.5936 | likely_pathogenic | 0.642 | pathogenic | 0.063 | Stabilizing | 0.992 | D | 0.604 | neutral | None | None | None | None | N |
E/Q | 0.2979 | likely_benign | 0.3224 | benign | 0.39 | Stabilizing | 0.999 | D | 0.685 | prob.neutral | N | 0.48340988 | None | None | N |
E/R | 0.5834 | likely_pathogenic | 0.6683 | pathogenic | 0.623 | Stabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | N |
E/S | 0.4747 | ambiguous | 0.4987 | ambiguous | 0.228 | Stabilizing | 0.997 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/T | 0.5356 | ambiguous | 0.58 | pathogenic | 0.357 | Stabilizing | 0.999 | D | 0.636 | neutral | None | None | None | None | N |
E/V | 0.4556 | ambiguous | 0.5035 | ambiguous | 0.063 | Stabilizing | 0.998 | D | 0.603 | neutral | N | 0.493057892 | None | None | N |
E/W | 0.9924 | likely_pathogenic | 0.9945 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
E/Y | 0.9567 | likely_pathogenic | 0.9651 | pathogenic | -0.074 | Destabilizing | 1.0 | D | 0.592 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.