Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23512 | 70759;70760;70761 | chr2:178575598;178575597;178575596 | chr2:179440325;179440324;179440323 |
N2AB | 21871 | 65836;65837;65838 | chr2:178575598;178575597;178575596 | chr2:179440325;179440324;179440323 |
N2A | 20944 | 63055;63056;63057 | chr2:178575598;178575597;178575596 | chr2:179440325;179440324;179440323 |
N2B | 14447 | 43564;43565;43566 | chr2:178575598;178575597;178575596 | chr2:179440325;179440324;179440323 |
Novex-1 | 14572 | 43939;43940;43941 | chr2:178575598;178575597;178575596 | chr2:179440325;179440324;179440323 |
Novex-2 | 14639 | 44140;44141;44142 | chr2:178575598;178575597;178575596 | chr2:179440325;179440324;179440323 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.974 | N | 0.459 | 0.342 | 0.335910606209 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
E/G | None | None | 1.0 | N | 0.765 | 0.585 | 0.459906663326 | gnomAD-4.0.0 | 1.59157E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85914E-06 | 0 | 0 |
E/K | rs752696466 | -0.669 | 0.998 | N | 0.538 | 0.388 | 0.315609569513 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs752696466 | -0.669 | 0.998 | N | 0.538 | 0.388 | 0.315609569513 | gnomAD-4.0.0 | 1.59154E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5104 | ambiguous | 0.5779 | pathogenic | -0.633 | Destabilizing | 0.997 | D | 0.677 | prob.neutral | N | 0.481520094 | None | None | I |
E/C | 0.9267 | likely_pathogenic | 0.9445 | pathogenic | -0.429 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
E/D | 0.9006 | likely_pathogenic | 0.9221 | pathogenic | -1.366 | Destabilizing | 0.974 | D | 0.459 | neutral | N | 0.521566946 | None | None | I |
E/F | 0.9735 | likely_pathogenic | 0.9832 | pathogenic | -0.957 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
E/G | 0.7537 | likely_pathogenic | 0.8233 | pathogenic | -0.941 | Destabilizing | 1.0 | D | 0.765 | deleterious | N | 0.510046057 | None | None | I |
E/H | 0.934 | likely_pathogenic | 0.9522 | pathogenic | -1.212 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
E/I | 0.636 | likely_pathogenic | 0.7022 | pathogenic | 0.183 | Stabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | I |
E/K | 0.5762 | likely_pathogenic | 0.671 | pathogenic | -0.536 | Destabilizing | 0.998 | D | 0.538 | neutral | N | 0.479571538 | None | None | I |
E/L | 0.872 | likely_pathogenic | 0.9135 | pathogenic | 0.183 | Stabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | I |
E/M | 0.7441 | likely_pathogenic | 0.8045 | pathogenic | 0.664 | Stabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | I |
E/N | 0.9178 | likely_pathogenic | 0.9367 | pathogenic | -0.819 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | I |
E/P | 0.9988 | likely_pathogenic | 0.9992 | pathogenic | -0.067 | Destabilizing | 0.994 | D | 0.83 | deleterious | None | None | None | None | I |
E/Q | 0.2891 | likely_benign | 0.3396 | benign | -0.72 | Destabilizing | 0.999 | D | 0.62 | neutral | N | 0.484571514 | None | None | I |
E/R | 0.7336 | likely_pathogenic | 0.7975 | pathogenic | -0.579 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
E/S | 0.6694 | likely_pathogenic | 0.7252 | pathogenic | -1.181 | Destabilizing | 0.997 | D | 0.597 | neutral | None | None | None | None | I |
E/T | 0.6763 | likely_pathogenic | 0.7358 | pathogenic | -0.908 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | I |
E/V | 0.3434 | ambiguous | 0.4062 | ambiguous | -0.067 | Destabilizing | 0.998 | D | 0.829 | deleterious | N | 0.448303854 | None | None | I |
E/W | 0.995 | likely_pathogenic | 0.9966 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
E/Y | 0.9724 | likely_pathogenic | 0.9807 | pathogenic | -0.755 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.