Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23515 | 70768;70769;70770 | chr2:178575589;178575588;178575587 | chr2:179440316;179440315;179440314 |
N2AB | 21874 | 65845;65846;65847 | chr2:178575589;178575588;178575587 | chr2:179440316;179440315;179440314 |
N2A | 20947 | 63064;63065;63066 | chr2:178575589;178575588;178575587 | chr2:179440316;179440315;179440314 |
N2B | 14450 | 43573;43574;43575 | chr2:178575589;178575588;178575587 | chr2:179440316;179440315;179440314 |
Novex-1 | 14575 | 43948;43949;43950 | chr2:178575589;178575588;178575587 | chr2:179440316;179440315;179440314 |
Novex-2 | 14642 | 44149;44150;44151 | chr2:178575589;178575588;178575587 | chr2:179440316;179440315;179440314 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.952 | N | 0.467 | 0.304 | 0.394837016283 | gnomAD-4.0.0 | 8.89535E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.16941E-05 | 0 | 0 |
Y/D | None | None | 0.952 | N | 0.494 | 0.359 | 0.588141112584 | gnomAD-4.0.0 | 1.59154E-06 | None | None | None | None | I | None | 5.65739E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.889 | likely_pathogenic | 0.9287 | pathogenic | -0.673 | Destabilizing | 0.332 | N | 0.461 | neutral | None | None | None | None | I |
Y/C | 0.4104 | ambiguous | 0.563 | ambiguous | 0.112 | Stabilizing | 0.952 | D | 0.467 | neutral | N | 0.473659736 | None | None | I |
Y/D | 0.9258 | likely_pathogenic | 0.9397 | pathogenic | 0.981 | Stabilizing | 0.952 | D | 0.494 | neutral | N | 0.510625033 | None | None | I |
Y/E | 0.9656 | likely_pathogenic | 0.9763 | pathogenic | 0.955 | Stabilizing | 0.882 | D | 0.522 | neutral | None | None | None | None | I |
Y/F | 0.0863 | likely_benign | 0.0929 | benign | -0.391 | Destabilizing | None | N | 0.157 | neutral | N | 0.481539354 | None | None | I |
Y/G | 0.9145 | likely_pathogenic | 0.9401 | pathogenic | -0.853 | Destabilizing | 0.71 | D | 0.521 | neutral | None | None | None | None | I |
Y/H | 0.6142 | likely_pathogenic | 0.693 | pathogenic | 0.213 | Stabilizing | 0.855 | D | 0.377 | neutral | N | 0.511283471 | None | None | I |
Y/I | 0.5802 | likely_pathogenic | 0.7003 | pathogenic | -0.232 | Destabilizing | 0.01 | N | 0.413 | neutral | None | None | None | None | I |
Y/K | 0.9617 | likely_pathogenic | 0.9757 | pathogenic | 0.28 | Stabilizing | 0.228 | N | 0.505 | neutral | None | None | None | None | I |
Y/L | 0.6854 | likely_pathogenic | 0.7481 | pathogenic | -0.232 | Destabilizing | None | N | 0.183 | neutral | None | None | None | None | I |
Y/M | 0.7306 | likely_pathogenic | 0.7966 | pathogenic | -0.027 | Destabilizing | 0.014 | N | 0.272 | neutral | None | None | None | None | I |
Y/N | 0.5644 | likely_pathogenic | 0.6267 | pathogenic | 0.125 | Stabilizing | 0.952 | D | 0.499 | neutral | N | 0.469238736 | None | None | I |
Y/P | 0.9959 | likely_pathogenic | 0.9965 | pathogenic | -0.359 | Destabilizing | 0.963 | D | 0.484 | neutral | None | None | None | None | I |
Y/Q | 0.9313 | likely_pathogenic | 0.9573 | pathogenic | 0.133 | Stabilizing | 0.72 | D | 0.467 | neutral | None | None | None | None | I |
Y/R | 0.9348 | likely_pathogenic | 0.957 | pathogenic | 0.572 | Stabilizing | 0.781 | D | 0.503 | neutral | None | None | None | None | I |
Y/S | 0.8194 | likely_pathogenic | 0.8782 | pathogenic | -0.346 | Destabilizing | 0.648 | D | 0.503 | neutral | N | 0.472961719 | None | None | I |
Y/T | 0.8942 | likely_pathogenic | 0.936 | pathogenic | -0.28 | Destabilizing | 0.71 | D | 0.469 | neutral | None | None | None | None | I |
Y/V | 0.5571 | ambiguous | 0.6769 | pathogenic | -0.359 | Destabilizing | 0.098 | N | 0.351 | neutral | None | None | None | None | I |
Y/W | 0.6285 | likely_pathogenic | 0.6888 | pathogenic | -0.507 | Destabilizing | 0.936 | D | 0.405 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.