Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23519 | 70780;70781;70782 | chr2:178575577;178575576;178575575 | chr2:179440304;179440303;179440302 |
N2AB | 21878 | 65857;65858;65859 | chr2:178575577;178575576;178575575 | chr2:179440304;179440303;179440302 |
N2A | 20951 | 63076;63077;63078 | chr2:178575577;178575576;178575575 | chr2:179440304;179440303;179440302 |
N2B | 14454 | 43585;43586;43587 | chr2:178575577;178575576;178575575 | chr2:179440304;179440303;179440302 |
Novex-1 | 14579 | 43960;43961;43962 | chr2:178575577;178575576;178575575 | chr2:179440304;179440303;179440302 |
Novex-2 | 14646 | 44161;44162;44163 | chr2:178575577;178575576;178575575 | chr2:179440304;179440303;179440302 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1267057579 | 0.57 | 0.822 | N | 0.637 | 0.245 | 0.371344866733 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
E/K | rs1267057579 | 0.57 | 0.822 | N | 0.637 | 0.245 | 0.371344866733 | gnomAD-4.0.0 | 2.05277E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.51978E-05 | None | 0 | 0 | 1.7991E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2347 | likely_benign | 0.278 | benign | -0.477 | Destabilizing | 0.698 | D | 0.647 | neutral | N | 0.469887527 | None | None | I |
E/C | 0.8588 | likely_pathogenic | 0.8844 | pathogenic | -0.047 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | I |
E/D | 0.2082 | likely_benign | 0.2245 | benign | -0.441 | Destabilizing | 0.904 | D | 0.603 | neutral | N | 0.493527216 | None | None | I |
E/F | 0.7492 | likely_pathogenic | 0.8251 | pathogenic | -0.399 | Destabilizing | 0.956 | D | 0.74 | deleterious | None | None | None | None | I |
E/G | 0.4182 | ambiguous | 0.4919 | ambiguous | -0.679 | Destabilizing | 0.822 | D | 0.666 | neutral | N | 0.481888943 | None | None | I |
E/H | 0.6764 | likely_pathogenic | 0.7467 | pathogenic | -0.245 | Destabilizing | 0.998 | D | 0.577 | neutral | None | None | None | None | I |
E/I | 0.2033 | likely_benign | 0.2661 | benign | 0.022 | Stabilizing | 0.754 | D | 0.687 | prob.neutral | None | None | None | None | I |
E/K | 0.2745 | likely_benign | 0.3644 | ambiguous | 0.211 | Stabilizing | 0.822 | D | 0.637 | neutral | N | 0.509438031 | None | None | I |
E/L | 0.3052 | likely_benign | 0.3692 | ambiguous | 0.022 | Stabilizing | 0.754 | D | 0.678 | prob.neutral | None | None | None | None | I |
E/M | 0.3883 | ambiguous | 0.458 | ambiguous | 0.197 | Stabilizing | 0.994 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/N | 0.4045 | ambiguous | 0.4774 | ambiguous | -0.064 | Destabilizing | 0.978 | D | 0.605 | neutral | None | None | None | None | I |
E/P | 0.6819 | likely_pathogenic | 0.7145 | pathogenic | -0.124 | Destabilizing | 0.019 | N | 0.417 | neutral | None | None | None | None | I |
E/Q | 0.1999 | likely_benign | 0.2295 | benign | -0.042 | Destabilizing | 0.97 | D | 0.629 | neutral | N | 0.472938947 | None | None | I |
E/R | 0.4689 | ambiguous | 0.576 | pathogenic | 0.399 | Stabilizing | 0.978 | D | 0.603 | neutral | None | None | None | None | I |
E/S | 0.3444 | ambiguous | 0.3936 | ambiguous | -0.236 | Destabilizing | 0.86 | D | 0.62 | neutral | None | None | None | None | I |
E/T | 0.3242 | likely_benign | 0.3844 | ambiguous | -0.075 | Destabilizing | 0.86 | D | 0.689 | prob.neutral | None | None | None | None | I |
E/V | 0.1294 | likely_benign | 0.1689 | benign | -0.124 | Destabilizing | 0.014 | N | 0.428 | neutral | N | 0.493873933 | None | None | I |
E/W | 0.9545 | likely_pathogenic | 0.9692 | pathogenic | -0.249 | Destabilizing | 0.998 | D | 0.784 | deleterious | None | None | None | None | I |
E/Y | 0.7076 | likely_pathogenic | 0.7764 | pathogenic | -0.159 | Destabilizing | 0.978 | D | 0.723 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.