Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23520 | 70783;70784;70785 | chr2:178575574;178575573;178575572 | chr2:179440301;179440300;179440299 |
N2AB | 21879 | 65860;65861;65862 | chr2:178575574;178575573;178575572 | chr2:179440301;179440300;179440299 |
N2A | 20952 | 63079;63080;63081 | chr2:178575574;178575573;178575572 | chr2:179440301;179440300;179440299 |
N2B | 14455 | 43588;43589;43590 | chr2:178575574;178575573;178575572 | chr2:179440301;179440300;179440299 |
Novex-1 | 14580 | 43963;43964;43965 | chr2:178575574;178575573;178575572 | chr2:179440301;179440300;179440299 |
Novex-2 | 14647 | 44164;44165;44166 | chr2:178575574;178575573;178575572 | chr2:179440301;179440300;179440299 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs763169614 | -0.755 | 0.997 | D | 0.762 | 0.418 | 0.615473259424 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
P/L | rs763169614 | -0.755 | 0.997 | D | 0.762 | 0.418 | 0.615473259424 | gnomAD-4.0.0 | 1.98434E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.60869E-05 | 0 | 0 |
P/R | rs763169614 | -0.306 | 1.0 | D | 0.845 | 0.458 | 0.486779940545 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
P/R | rs763169614 | -0.306 | 1.0 | D | 0.845 | 0.458 | 0.486779940545 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/R | rs763169614 | -0.306 | 1.0 | D | 0.845 | 0.458 | 0.486779940545 | gnomAD-4.0.0 | 6.57912E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47089E-05 | 0 | 0 |
P/T | rs1296805014 | -1.036 | 0.993 | N | 0.795 | 0.335 | 0.39843156188 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
P/T | rs1296805014 | -1.036 | 0.993 | N | 0.795 | 0.335 | 0.39843156188 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/T | rs1296805014 | -1.036 | 0.993 | N | 0.795 | 0.335 | 0.39843156188 | gnomAD-4.0.0 | 6.57756E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47076E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1202 | likely_benign | 0.1436 | benign | -1.03 | Destabilizing | 0.932 | D | 0.645 | neutral | N | 0.472138799 | None | None | I |
P/C | 0.6596 | likely_pathogenic | 0.741 | pathogenic | -0.632 | Destabilizing | 0.999 | D | 0.85 | deleterious | None | None | None | None | I |
P/D | 0.9166 | likely_pathogenic | 0.9543 | pathogenic | -0.99 | Destabilizing | 0.99 | D | 0.807 | deleterious | None | None | None | None | I |
P/E | 0.802 | likely_pathogenic | 0.8882 | pathogenic | -1.087 | Destabilizing | 0.993 | D | 0.8 | deleterious | None | None | None | None | I |
P/F | 0.683 | likely_pathogenic | 0.8063 | pathogenic | -1.072 | Destabilizing | 0.789 | D | 0.651 | neutral | None | None | None | None | I |
P/G | 0.4903 | ambiguous | 0.5301 | ambiguous | -1.226 | Destabilizing | 0.997 | D | 0.721 | prob.delet. | None | None | None | None | I |
P/H | 0.6122 | likely_pathogenic | 0.7367 | pathogenic | -0.768 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | I |
P/I | 0.7165 | likely_pathogenic | 0.7903 | pathogenic | -0.634 | Destabilizing | 0.997 | D | 0.811 | deleterious | None | None | None | None | I |
P/K | 0.8614 | likely_pathogenic | 0.9164 | pathogenic | -0.885 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | I |
P/L | 0.4417 | ambiguous | 0.5549 | ambiguous | -0.634 | Destabilizing | 0.997 | D | 0.762 | deleterious | D | 0.527034222 | None | None | I |
P/M | 0.6011 | likely_pathogenic | 0.7076 | pathogenic | -0.425 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
P/N | 0.8016 | likely_pathogenic | 0.8596 | pathogenic | -0.505 | Destabilizing | 0.998 | D | 0.84 | deleterious | None | None | None | None | I |
P/Q | 0.6085 | likely_pathogenic | 0.7291 | pathogenic | -0.811 | Destabilizing | 0.999 | D | 0.833 | deleterious | D | 0.546912903 | None | None | I |
P/R | 0.7757 | likely_pathogenic | 0.8579 | pathogenic | -0.247 | Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.528301669 | None | None | I |
P/S | 0.319 | likely_benign | 0.4039 | ambiguous | -0.87 | Destabilizing | 0.997 | D | 0.755 | deleterious | N | 0.511411955 | None | None | I |
P/T | 0.3871 | ambiguous | 0.4563 | ambiguous | -0.877 | Destabilizing | 0.993 | D | 0.795 | deleterious | N | 0.520161368 | None | None | I |
P/V | 0.5399 | ambiguous | 0.6294 | pathogenic | -0.731 | Destabilizing | 0.993 | D | 0.768 | deleterious | None | None | None | None | I |
P/W | 0.8706 | likely_pathogenic | 0.9309 | pathogenic | -1.142 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
P/Y | 0.7094 | likely_pathogenic | 0.8156 | pathogenic | -0.886 | Destabilizing | 0.997 | D | 0.816 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.