Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23522 | 70789;70790;70791 | chr2:178575568;178575567;178575566 | chr2:179440295;179440294;179440293 |
N2AB | 21881 | 65866;65867;65868 | chr2:178575568;178575567;178575566 | chr2:179440295;179440294;179440293 |
N2A | 20954 | 63085;63086;63087 | chr2:178575568;178575567;178575566 | chr2:179440295;179440294;179440293 |
N2B | 14457 | 43594;43595;43596 | chr2:178575568;178575567;178575566 | chr2:179440295;179440294;179440293 |
Novex-1 | 14582 | 43969;43970;43971 | chr2:178575568;178575567;178575566 | chr2:179440295;179440294;179440293 |
Novex-2 | 14649 | 44170;44171;44172 | chr2:178575568;178575567;178575566 | chr2:179440295;179440294;179440293 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs561586925 | -0.34 | 0.995 | N | 0.805 | 0.302 | 0.476908202251 | gnomAD-2.1.1 | 2.41E-05 | None | None | None | None | N | None | 0 | 8.69E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 3.31895E-04 |
E/K | rs561586925 | -0.34 | 0.995 | N | 0.805 | 0.302 | 0.476908202251 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 1.96515E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs561586925 | -0.34 | 0.995 | N | 0.805 | 0.302 | 0.476908202251 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
E/K | rs561586925 | -0.34 | 0.995 | N | 0.805 | 0.302 | 0.476908202251 | gnomAD-4.0.0 | 7.43646E-06 | None | None | None | None | N | None | 0 | 8.33222E-05 | None | 0 | 0 | None | 0 | 0 | 4.2385E-06 | 0 | 3.20123E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2967 | likely_benign | 0.377 | ambiguous | -0.86 | Destabilizing | 0.99 | D | 0.785 | deleterious | N | 0.514206346 | None | None | N |
E/C | 0.921 | likely_pathogenic | 0.9452 | pathogenic | -0.401 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
E/D | 0.2688 | likely_benign | 0.3079 | benign | -0.941 | Destabilizing | 0.928 | D | 0.747 | deleterious | N | 0.470124109 | None | None | N |
E/F | 0.8918 | likely_pathogenic | 0.9213 | pathogenic | 0.043 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
E/G | 0.4979 | ambiguous | 0.5982 | pathogenic | -1.266 | Destabilizing | 0.999 | D | 0.721 | deleterious | N | 0.483179162 | None | None | N |
E/H | 0.7828 | likely_pathogenic | 0.8359 | pathogenic | -0.092 | Destabilizing | 1.0 | D | 0.737 | deleterious | None | None | None | None | N |
E/I | 0.486 | ambiguous | 0.5995 | pathogenic | 0.268 | Stabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
E/K | 0.4349 | ambiguous | 0.5498 | ambiguous | -0.385 | Destabilizing | 0.995 | D | 0.805 | deleterious | N | 0.474265166 | None | None | N |
E/L | 0.6229 | likely_pathogenic | 0.7205 | pathogenic | 0.268 | Stabilizing | 0.998 | D | 0.727 | deleterious | None | None | None | None | N |
E/M | 0.5939 | likely_pathogenic | 0.6929 | pathogenic | 0.707 | Stabilizing | 0.996 | D | 0.837 | deleterious | None | None | None | None | N |
E/N | 0.5788 | likely_pathogenic | 0.679 | pathogenic | -1.082 | Destabilizing | 0.995 | D | 0.759 | deleterious | None | None | None | None | N |
E/P | 0.8849 | likely_pathogenic | 0.9179 | pathogenic | -0.087 | Destabilizing | 0.984 | D | 0.741 | deleterious | None | None | None | None | N |
E/Q | 0.2866 | likely_benign | 0.3505 | ambiguous | -0.903 | Destabilizing | 0.998 | D | 0.767 | deleterious | N | 0.472138799 | None | None | N |
E/R | 0.6337 | likely_pathogenic | 0.7369 | pathogenic | -0.036 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
E/S | 0.4027 | ambiguous | 0.5049 | ambiguous | -1.429 | Destabilizing | 0.992 | D | 0.787 | deleterious | None | None | None | None | N |
E/T | 0.3623 | ambiguous | 0.4845 | ambiguous | -1.07 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/V | 0.2809 | likely_benign | 0.3745 | ambiguous | -0.087 | Destabilizing | 0.995 | D | 0.753 | deleterious | N | 0.483495104 | None | None | N |
E/W | 0.9757 | likely_pathogenic | 0.9834 | pathogenic | 0.426 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/Y | 0.8585 | likely_pathogenic | 0.8969 | pathogenic | 0.358 | Stabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.