Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23525 | 70798;70799;70800 | chr2:178575559;178575558;178575557 | chr2:179440286;179440285;179440284 |
N2AB | 21884 | 65875;65876;65877 | chr2:178575559;178575558;178575557 | chr2:179440286;179440285;179440284 |
N2A | 20957 | 63094;63095;63096 | chr2:178575559;178575558;178575557 | chr2:179440286;179440285;179440284 |
N2B | 14460 | 43603;43604;43605 | chr2:178575559;178575558;178575557 | chr2:179440286;179440285;179440284 |
Novex-1 | 14585 | 43978;43979;43980 | chr2:178575559;178575558;178575557 | chr2:179440286;179440285;179440284 |
Novex-2 | 14652 | 44179;44180;44181 | chr2:178575559;178575558;178575557 | chr2:179440286;179440285;179440284 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1709774465 | None | 0.521 | N | 0.522 | 0.334 | 0.391775403332 | gnomAD-4.0.0 | 1.59151E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85914E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1481 | likely_benign | 0.162 | benign | -0.145 | Destabilizing | 0.14 | N | 0.463 | neutral | N | 0.474110127 | None | None | N |
E/C | 0.7898 | likely_pathogenic | 0.8194 | pathogenic | -0.325 | Destabilizing | 0.972 | D | 0.768 | deleterious | None | None | None | None | N |
E/D | 0.0896 | likely_benign | 0.0955 | benign | -0.308 | Destabilizing | None | N | 0.157 | neutral | N | 0.447154634 | None | None | N |
E/F | 0.6573 | likely_pathogenic | 0.699 | pathogenic | 0.016 | Stabilizing | 0.946 | D | 0.751 | deleterious | None | None | None | None | N |
E/G | 0.1747 | likely_benign | 0.2042 | benign | -0.303 | Destabilizing | 0.521 | D | 0.522 | neutral | N | 0.47636508 | None | None | N |
E/H | 0.4588 | ambiguous | 0.5161 | ambiguous | 0.636 | Stabilizing | 0.939 | D | 0.509 | neutral | None | None | None | None | N |
E/I | 0.2705 | likely_benign | 0.2961 | benign | 0.226 | Stabilizing | 0.728 | D | 0.791 | deleterious | None | None | None | None | N |
E/K | 0.1889 | likely_benign | 0.2293 | benign | 0.359 | Stabilizing | 0.002 | N | 0.305 | neutral | N | 0.468767756 | None | None | N |
E/L | 0.3313 | likely_benign | 0.3667 | ambiguous | 0.226 | Stabilizing | 0.568 | D | 0.688 | prob.delet. | None | None | None | None | N |
E/M | 0.3713 | ambiguous | 0.4012 | ambiguous | -0.026 | Destabilizing | 0.846 | D | 0.693 | prob.delet. | None | None | None | None | N |
E/N | 0.2047 | likely_benign | 0.2309 | benign | -0.076 | Destabilizing | 0.149 | N | 0.476 | neutral | None | None | None | None | N |
E/P | 0.8298 | likely_pathogenic | 0.8851 | pathogenic | 0.121 | Stabilizing | 0.284 | N | 0.54 | neutral | None | None | None | None | N |
E/Q | 0.1506 | likely_benign | 0.1687 | benign | -0.019 | Destabilizing | 0.302 | N | 0.489 | neutral | N | 0.478744936 | None | None | N |
E/R | 0.3294 | likely_benign | 0.4024 | ambiguous | 0.692 | Stabilizing | 0.585 | D | 0.465 | neutral | None | None | None | None | N |
E/S | 0.1712 | likely_benign | 0.1863 | benign | -0.198 | Destabilizing | 0.302 | N | 0.376 | neutral | None | None | None | None | N |
E/T | 0.1724 | likely_benign | 0.1873 | benign | -0.053 | Destabilizing | 0.677 | D | 0.489 | neutral | None | None | None | None | N |
E/V | 0.1686 | likely_benign | 0.1863 | benign | 0.121 | Stabilizing | 0.414 | N | 0.618 | neutral | N | 0.49128933 | None | None | N |
E/W | 0.8878 | likely_pathogenic | 0.918 | pathogenic | 0.137 | Stabilizing | 0.994 | D | 0.757 | deleterious | None | None | None | None | N |
E/Y | 0.5411 | ambiguous | 0.5932 | pathogenic | 0.255 | Stabilizing | 0.979 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.