Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23529 | 70810;70811;70812 | chr2:178575547;178575546;178575545 | chr2:179440274;179440273;179440272 |
N2AB | 21888 | 65887;65888;65889 | chr2:178575547;178575546;178575545 | chr2:179440274;179440273;179440272 |
N2A | 20961 | 63106;63107;63108 | chr2:178575547;178575546;178575545 | chr2:179440274;179440273;179440272 |
N2B | 14464 | 43615;43616;43617 | chr2:178575547;178575546;178575545 | chr2:179440274;179440273;179440272 |
Novex-1 | 14589 | 43990;43991;43992 | chr2:178575547;178575546;178575545 | chr2:179440274;179440273;179440272 |
Novex-2 | 14656 | 44191;44192;44193 | chr2:178575547;178575546;178575545 | chr2:179440274;179440273;179440272 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1709769243 | None | 0.977 | N | 0.359 | 0.196 | 0.320256813643 | gnomAD-4.0.0 | 2.73701E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69866E-06 | 0 | 1.65662E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6684 | likely_pathogenic | 0.6646 | pathogenic | -1.832 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
A/D | 0.9887 | likely_pathogenic | 0.991 | pathogenic | -2.512 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | N | 0.50952217 | None | None | N |
A/E | 0.976 | likely_pathogenic | 0.9807 | pathogenic | -2.424 | Highly Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
A/F | 0.8738 | likely_pathogenic | 0.8714 | pathogenic | -1.089 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
A/G | 0.5478 | ambiguous | 0.5762 | pathogenic | -1.607 | Destabilizing | 0.996 | D | 0.593 | neutral | N | 0.476440758 | None | None | N |
A/H | 0.9886 | likely_pathogenic | 0.9903 | pathogenic | -1.617 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
A/I | 0.2611 | likely_benign | 0.2568 | benign | -0.415 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
A/K | 0.9928 | likely_pathogenic | 0.9944 | pathogenic | -1.402 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
A/L | 0.4287 | ambiguous | 0.4138 | ambiguous | -0.415 | Destabilizing | 0.999 | D | 0.653 | prob.neutral | None | None | None | None | N |
A/M | 0.5231 | ambiguous | 0.5394 | ambiguous | -0.763 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
A/N | 0.9312 | likely_pathogenic | 0.9463 | pathogenic | -1.569 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
A/P | 0.6166 | likely_pathogenic | 0.6424 | pathogenic | -0.659 | Destabilizing | 1.0 | D | 0.813 | deleterious | N | 0.501255691 | None | None | N |
A/Q | 0.9661 | likely_pathogenic | 0.9719 | pathogenic | -1.624 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
A/R | 0.9815 | likely_pathogenic | 0.9845 | pathogenic | -1.199 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
A/S | 0.317 | likely_benign | 0.3496 | ambiguous | -1.951 | Destabilizing | 0.999 | D | 0.647 | neutral | N | 0.482517145 | None | None | N |
A/T | 0.3031 | likely_benign | 0.3613 | ambiguous | -1.76 | Destabilizing | 1.0 | D | 0.667 | prob.neutral | N | 0.502815916 | None | None | N |
A/V | 0.1265 | likely_benign | 0.1278 | benign | -0.659 | Destabilizing | 0.977 | D | 0.359 | neutral | N | 0.459006424 | None | None | N |
A/W | 0.9931 | likely_pathogenic | 0.9938 | pathogenic | -1.546 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
A/Y | 0.9656 | likely_pathogenic | 0.9671 | pathogenic | -1.109 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.