Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23531 | 70816;70817;70818 | chr2:178575541;178575540;178575539 | chr2:179440268;179440267;179440266 |
N2AB | 21890 | 65893;65894;65895 | chr2:178575541;178575540;178575539 | chr2:179440268;179440267;179440266 |
N2A | 20963 | 63112;63113;63114 | chr2:178575541;178575540;178575539 | chr2:179440268;179440267;179440266 |
N2B | 14466 | 43621;43622;43623 | chr2:178575541;178575540;178575539 | chr2:179440268;179440267;179440266 |
Novex-1 | 14591 | 43996;43997;43998 | chr2:178575541;178575540;178575539 | chr2:179440268;179440267;179440266 |
Novex-2 | 14658 | 44197;44198;44199 | chr2:178575541;178575540;178575539 | chr2:179440268;179440267;179440266 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1182129747 | None | 0.872 | N | 0.616 | 0.28 | 0.359357374593 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs1182129747 | None | 0.872 | N | 0.616 | 0.28 | 0.359357374593 | gnomAD-4.0.0 | 2.03004E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20497E-06 | 4.69836E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2976 | likely_benign | 0.3624 | ambiguous | -0.041 | Destabilizing | 0.88 | D | 0.565 | neutral | N | 0.518435942 | None | None | N |
E/C | 0.9413 | likely_pathogenic | 0.948 | pathogenic | 0.056 | Stabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
E/D | 0.3973 | ambiguous | 0.4093 | ambiguous | -0.257 | Destabilizing | 0.282 | N | 0.545 | neutral | N | 0.472607652 | None | None | N |
E/F | 0.9463 | likely_pathogenic | 0.9616 | pathogenic | -0.107 | Destabilizing | 0.997 | D | 0.749 | deleterious | None | None | None | None | N |
E/G | 0.4109 | ambiguous | 0.4776 | ambiguous | -0.169 | Destabilizing | 0.98 | D | 0.497 | neutral | N | 0.469248282 | None | None | N |
E/H | 0.8337 | likely_pathogenic | 0.8883 | pathogenic | 0.335 | Stabilizing | 0.989 | D | 0.436 | neutral | None | None | None | None | N |
E/I | 0.7509 | likely_pathogenic | 0.8121 | pathogenic | 0.239 | Stabilizing | 0.995 | D | 0.803 | deleterious | None | None | None | None | N |
E/K | 0.3875 | ambiguous | 0.4954 | ambiguous | 0.581 | Stabilizing | 0.872 | D | 0.616 | neutral | N | 0.495470066 | None | None | N |
E/L | 0.7379 | likely_pathogenic | 0.8029 | pathogenic | 0.239 | Stabilizing | 0.967 | D | 0.559 | neutral | None | None | None | None | N |
E/M | 0.6493 | likely_pathogenic | 0.7249 | pathogenic | 0.156 | Stabilizing | 0.992 | D | 0.69 | prob.delet. | None | None | None | None | N |
E/N | 0.6344 | likely_pathogenic | 0.6915 | pathogenic | 0.349 | Stabilizing | 0.965 | D | 0.509 | neutral | None | None | None | None | N |
E/P | 0.9889 | likely_pathogenic | 0.993 | pathogenic | 0.164 | Stabilizing | 0.965 | D | 0.581 | neutral | None | None | None | None | N |
E/Q | 0.1858 | likely_benign | 0.2372 | benign | 0.353 | Stabilizing | 0.275 | N | 0.193 | neutral | N | 0.497140737 | None | None | N |
E/R | 0.579 | likely_pathogenic | 0.6897 | pathogenic | 0.721 | Stabilizing | 0.948 | D | 0.528 | neutral | None | None | None | None | N |
E/S | 0.4111 | ambiguous | 0.4889 | ambiguous | 0.217 | Stabilizing | 0.907 | D | 0.507 | neutral | None | None | None | None | N |
E/T | 0.4742 | ambiguous | 0.5662 | pathogenic | 0.327 | Stabilizing | 0.965 | D | 0.549 | neutral | None | None | None | None | N |
E/V | 0.4844 | ambiguous | 0.5604 | ambiguous | 0.164 | Stabilizing | 0.97 | D | 0.461 | neutral | N | 0.495216577 | None | None | N |
E/W | 0.9887 | likely_pathogenic | 0.9926 | pathogenic | -0.056 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
E/Y | 0.9282 | likely_pathogenic | 0.947 | pathogenic | 0.125 | Stabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.