Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23534 | 70825;70826;70827 | chr2:178575532;178575531;178575530 | chr2:179440259;179440258;179440257 |
N2AB | 21893 | 65902;65903;65904 | chr2:178575532;178575531;178575530 | chr2:179440259;179440258;179440257 |
N2A | 20966 | 63121;63122;63123 | chr2:178575532;178575531;178575530 | chr2:179440259;179440258;179440257 |
N2B | 14469 | 43630;43631;43632 | chr2:178575532;178575531;178575530 | chr2:179440259;179440258;179440257 |
Novex-1 | 14594 | 44005;44006;44007 | chr2:178575532;178575531;178575530 | chr2:179440259;179440258;179440257 |
Novex-2 | 14661 | 44206;44207;44208 | chr2:178575532;178575531;178575530 | chr2:179440259;179440258;179440257 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.331 | N | 0.767 | 0.218 | 0.367612772649 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0856 | likely_benign | 0.0897 | benign | -0.611 | Destabilizing | 0.104 | N | 0.503 | neutral | N | 0.475895597 | None | None | N |
S/C | 0.1297 | likely_benign | 0.1399 | benign | -0.559 | Destabilizing | 0.002 | N | 0.609 | neutral | N | 0.510524399 | None | None | N |
S/D | 0.5153 | ambiguous | 0.566 | pathogenic | -1.087 | Destabilizing | 0.89 | D | 0.529 | neutral | None | None | None | None | N |
S/E | 0.5301 | ambiguous | 0.6133 | pathogenic | -1.05 | Destabilizing | 0.726 | D | 0.512 | neutral | None | None | None | None | N |
S/F | 0.1872 | likely_benign | 0.2114 | benign | -0.645 | Destabilizing | 0.331 | N | 0.767 | deleterious | N | 0.510270909 | None | None | N |
S/G | 0.1101 | likely_benign | 0.1119 | benign | -0.901 | Destabilizing | 0.431 | N | 0.456 | neutral | None | None | None | None | N |
S/H | 0.4603 | ambiguous | 0.5386 | ambiguous | -1.474 | Destabilizing | 0.968 | D | 0.689 | prob.neutral | None | None | None | None | N |
S/I | 0.2912 | likely_benign | 0.3022 | benign | 0.064 | Stabilizing | 0.157 | N | 0.726 | prob.delet. | None | None | None | None | N |
S/K | 0.7801 | likely_pathogenic | 0.8495 | pathogenic | -0.912 | Destabilizing | 0.431 | N | 0.511 | neutral | None | None | None | None | N |
S/L | 0.0587 | likely_benign | 0.0651 | benign | 0.064 | Stabilizing | None | N | 0.535 | neutral | None | None | None | None | N |
S/M | 0.1435 | likely_benign | 0.1715 | benign | 0.322 | Stabilizing | 0.396 | N | 0.686 | prob.neutral | None | None | None | None | N |
S/N | 0.2553 | likely_benign | 0.2563 | benign | -1.052 | Destabilizing | 0.89 | D | 0.53 | neutral | None | None | None | None | N |
S/P | 0.7947 | likely_pathogenic | 0.8048 | pathogenic | -0.126 | Destabilizing | 0.859 | D | 0.687 | prob.neutral | N | 0.505454609 | None | None | N |
S/Q | 0.5037 | ambiguous | 0.6047 | pathogenic | -1.151 | Destabilizing | 0.89 | D | 0.539 | neutral | None | None | None | None | N |
S/R | 0.7802 | likely_pathogenic | 0.841 | pathogenic | -0.876 | Destabilizing | 0.726 | D | 0.688 | prob.neutral | None | None | None | None | N |
S/T | 0.1037 | likely_benign | 0.1024 | benign | -0.889 | Destabilizing | 0.22 | N | 0.48 | neutral | N | 0.496783739 | None | None | N |
S/V | 0.2248 | likely_benign | 0.2465 | benign | -0.126 | Destabilizing | 0.157 | N | 0.696 | prob.neutral | None | None | None | None | N |
S/W | 0.3808 | ambiguous | 0.4429 | ambiguous | -0.74 | Destabilizing | 0.968 | D | 0.818 | deleterious | None | None | None | None | N |
S/Y | 0.213 | likely_benign | 0.241 | benign | -0.432 | Destabilizing | 0.667 | D | 0.772 | deleterious | N | 0.51001742 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.