Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23535 | 70828;70829;70830 | chr2:178575529;178575528;178575527 | chr2:179440256;179440255;179440254 |
N2AB | 21894 | 65905;65906;65907 | chr2:178575529;178575528;178575527 | chr2:179440256;179440255;179440254 |
N2A | 20967 | 63124;63125;63126 | chr2:178575529;178575528;178575527 | chr2:179440256;179440255;179440254 |
N2B | 14470 | 43633;43634;43635 | chr2:178575529;178575528;178575527 | chr2:179440256;179440255;179440254 |
Novex-1 | 14595 | 44008;44009;44010 | chr2:178575529;178575528;178575527 | chr2:179440256;179440255;179440254 |
Novex-2 | 14662 | 44209;44210;44211 | chr2:178575529;178575528;178575527 | chr2:179440256;179440255;179440254 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | D | 0.838 | 0.481 | 0.663460038712 | gnomAD-4.0.0 | 1.59147E-06 | None | None | None | None | N | None | 0 | 2.28634E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/R | None | None | 1.0 | N | 0.873 | 0.474 | 0.501685917333 | gnomAD-4.0.0 | 1.59147E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0922 | likely_benign | 0.0913 | benign | -1.652 | Destabilizing | 0.731 | D | 0.449 | neutral | N | 0.493329641 | None | None | N |
P/C | 0.5736 | likely_pathogenic | 0.6071 | pathogenic | -1.262 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
P/D | 0.912 | likely_pathogenic | 0.9079 | pathogenic | -2.293 | Highly Destabilizing | 0.998 | D | 0.824 | deleterious | None | None | None | None | N |
P/E | 0.6279 | likely_pathogenic | 0.6173 | pathogenic | -2.301 | Highly Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
P/F | 0.7463 | likely_pathogenic | 0.7578 | pathogenic | -1.402 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
P/G | 0.6444 | likely_pathogenic | 0.6416 | pathogenic | -1.948 | Destabilizing | 0.997 | D | 0.785 | deleterious | None | None | None | None | N |
P/H | 0.509 | ambiguous | 0.5278 | ambiguous | -1.466 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
P/I | 0.4254 | ambiguous | 0.4467 | ambiguous | -0.926 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
P/K | 0.7114 | likely_pathogenic | 0.7081 | pathogenic | -1.352 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
P/L | 0.2777 | likely_benign | 0.2757 | benign | -0.926 | Destabilizing | 1.0 | D | 0.838 | deleterious | D | 0.531547807 | None | None | N |
P/M | 0.4801 | ambiguous | 0.4834 | ambiguous | -0.714 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/N | 0.7791 | likely_pathogenic | 0.7905 | pathogenic | -1.254 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
P/Q | 0.391 | ambiguous | 0.3856 | ambiguous | -1.505 | Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.503275335 | None | None | N |
P/R | 0.5482 | ambiguous | 0.5482 | ambiguous | -0.786 | Destabilizing | 1.0 | D | 0.873 | deleterious | N | 0.507567749 | None | None | N |
P/S | 0.2071 | likely_benign | 0.2228 | benign | -1.669 | Destabilizing | 0.997 | D | 0.785 | deleterious | N | 0.490842619 | None | None | N |
P/T | 0.2494 | likely_benign | 0.2551 | benign | -1.584 | Destabilizing | 0.999 | D | 0.815 | deleterious | N | 0.506353208 | None | None | N |
P/V | 0.2742 | likely_benign | 0.2883 | benign | -1.137 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
P/W | 0.9025 | likely_pathogenic | 0.9181 | pathogenic | -1.605 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
P/Y | 0.7792 | likely_pathogenic | 0.7842 | pathogenic | -1.318 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.