Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23537 | 70834;70835;70836 | chr2:178575523;178575522;178575521 | chr2:179440250;179440249;179440248 |
N2AB | 21896 | 65911;65912;65913 | chr2:178575523;178575522;178575521 | chr2:179440250;179440249;179440248 |
N2A | 20969 | 63130;63131;63132 | chr2:178575523;178575522;178575521 | chr2:179440250;179440249;179440248 |
N2B | 14472 | 43639;43640;43641 | chr2:178575523;178575522;178575521 | chr2:179440250;179440249;179440248 |
Novex-1 | 14597 | 44014;44015;44016 | chr2:178575523;178575522;178575521 | chr2:179440250;179440249;179440248 |
Novex-2 | 14664 | 44215;44216;44217 | chr2:178575523;178575522;178575521 | chr2:179440250;179440249;179440248 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | rs1193472633 | 0.213 | 0.638 | N | 0.759 | 0.288 | 0.504968073517 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1371 | likely_benign | 0.136 | benign | -0.478 | Destabilizing | 0.201 | N | 0.719 | prob.delet. | N | 0.446733347 | None | None | N |
D/C | 0.5872 | likely_pathogenic | 0.6086 | pathogenic | -0.244 | Destabilizing | 0.982 | D | 0.772 | deleterious | None | None | None | None | N |
D/E | 0.087 | likely_benign | 0.0864 | benign | -0.662 | Destabilizing | 0.001 | N | 0.229 | neutral | N | 0.417794519 | None | None | N |
D/F | 0.5496 | ambiguous | 0.5448 | ambiguous | -0.215 | Destabilizing | 0.935 | D | 0.781 | deleterious | None | None | None | None | N |
D/G | 0.1684 | likely_benign | 0.1663 | benign | -0.777 | Destabilizing | 0.334 | N | 0.693 | prob.neutral | N | 0.350244163 | None | None | N |
D/H | 0.3033 | likely_benign | 0.3028 | benign | -0.49 | Destabilizing | 0.931 | D | 0.745 | deleterious | N | 0.485945096 | None | None | N |
D/I | 0.2698 | likely_benign | 0.2548 | benign | 0.294 | Stabilizing | 0.826 | D | 0.783 | deleterious | None | None | None | None | N |
D/K | 0.3272 | likely_benign | 0.3366 | benign | -0.404 | Destabilizing | 0.25 | N | 0.661 | neutral | None | None | None | None | N |
D/L | 0.2802 | likely_benign | 0.2789 | benign | 0.294 | Stabilizing | 0.7 | D | 0.761 | deleterious | None | None | None | None | N |
D/M | 0.5011 | ambiguous | 0.4819 | ambiguous | 0.59 | Stabilizing | 0.982 | D | 0.771 | deleterious | None | None | None | None | N |
D/N | 0.1232 | likely_benign | 0.1136 | benign | -0.7 | Destabilizing | 0.334 | N | 0.658 | neutral | N | 0.463414953 | None | None | N |
D/P | 0.486 | ambiguous | 0.5417 | ambiguous | 0.061 | Stabilizing | 0.826 | D | 0.754 | deleterious | None | None | None | None | N |
D/Q | 0.258 | likely_benign | 0.2569 | benign | -0.604 | Destabilizing | 0.539 | D | 0.676 | prob.neutral | None | None | None | None | N |
D/R | 0.3951 | ambiguous | 0.3941 | ambiguous | -0.221 | Destabilizing | 0.539 | D | 0.767 | deleterious | None | None | None | None | N |
D/S | 0.121 | likely_benign | 0.1148 | benign | -0.89 | Destabilizing | 0.25 | N | 0.609 | neutral | None | None | None | None | N |
D/T | 0.2022 | likely_benign | 0.201 | benign | -0.66 | Destabilizing | 0.7 | D | 0.723 | prob.delet. | None | None | None | None | N |
D/V | 0.1657 | likely_benign | 0.1548 | benign | 0.061 | Stabilizing | 0.638 | D | 0.759 | deleterious | N | 0.453891392 | None | None | N |
D/W | 0.8702 | likely_pathogenic | 0.8818 | pathogenic | -0.074 | Destabilizing | 0.982 | D | 0.739 | prob.delet. | None | None | None | None | N |
D/Y | 0.2646 | likely_benign | 0.2538 | benign | -0.006 | Destabilizing | 0.916 | D | 0.781 | deleterious | N | 0.446157344 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.