Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23539 | 70840;70841;70842 | chr2:178575517;178575516;178575515 | chr2:179440244;179440243;179440242 |
N2AB | 21898 | 65917;65918;65919 | chr2:178575517;178575516;178575515 | chr2:179440244;179440243;179440242 |
N2A | 20971 | 63136;63137;63138 | chr2:178575517;178575516;178575515 | chr2:179440244;179440243;179440242 |
N2B | 14474 | 43645;43646;43647 | chr2:178575517;178575516;178575515 | chr2:179440244;179440243;179440242 |
Novex-1 | 14599 | 44020;44021;44022 | chr2:178575517;178575516;178575515 | chr2:179440244;179440243;179440242 |
Novex-2 | 14666 | 44221;44222;44223 | chr2:178575517;178575516;178575515 | chr2:179440244;179440243;179440242 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 1.0 | N | 0.876 | 0.68 | 0.846500284179 | gnomAD-4.0.0 | 3.18286E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.8659E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9515 | likely_pathogenic | 0.9449 | pathogenic | -2.745 | Highly Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
L/C | 0.8904 | likely_pathogenic | 0.8911 | pathogenic | -2.276 | Highly Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
L/D | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -3.254 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/E | 0.9954 | likely_pathogenic | 0.995 | pathogenic | -3.039 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
L/F | 0.7027 | likely_pathogenic | 0.6889 | pathogenic | -1.613 | Destabilizing | 1.0 | D | 0.834 | deleterious | N | 0.498362081 | None | None | N |
L/G | 0.9917 | likely_pathogenic | 0.9917 | pathogenic | -3.284 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/H | 0.9895 | likely_pathogenic | 0.9893 | pathogenic | -2.689 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.532483903 | None | None | N |
L/I | 0.1775 | likely_benign | 0.1543 | benign | -1.184 | Destabilizing | 0.999 | D | 0.661 | neutral | N | 0.475392533 | None | None | N |
L/K | 0.9917 | likely_pathogenic | 0.9918 | pathogenic | -2.157 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/M | 0.361 | ambiguous | 0.3504 | ambiguous | -1.31 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
L/N | 0.9941 | likely_pathogenic | 0.9935 | pathogenic | -2.505 | Highly Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
L/P | 0.9875 | likely_pathogenic | 0.9847 | pathogenic | -1.687 | Destabilizing | 1.0 | D | 0.884 | deleterious | N | 0.458769642 | None | None | N |
L/Q | 0.9802 | likely_pathogenic | 0.9796 | pathogenic | -2.392 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/R | 0.9822 | likely_pathogenic | 0.9829 | pathogenic | -1.819 | Destabilizing | 1.0 | D | 0.876 | deleterious | N | 0.520963014 | None | None | N |
L/S | 0.992 | likely_pathogenic | 0.9904 | pathogenic | -3.186 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/T | 0.948 | likely_pathogenic | 0.9322 | pathogenic | -2.828 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
L/V | 0.174 | likely_benign | 0.1509 | benign | -1.687 | Destabilizing | 0.999 | D | 0.661 | neutral | N | 0.437812793 | None | None | N |
L/W | 0.968 | likely_pathogenic | 0.9675 | pathogenic | -1.997 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
L/Y | 0.9765 | likely_pathogenic | 0.9766 | pathogenic | -1.757 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.