Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23545 | 70858;70859;70860 | chr2:178575499;178575498;178575497 | chr2:179440226;179440225;179440224 |
N2AB | 21904 | 65935;65936;65937 | chr2:178575499;178575498;178575497 | chr2:179440226;179440225;179440224 |
N2A | 20977 | 63154;63155;63156 | chr2:178575499;178575498;178575497 | chr2:179440226;179440225;179440224 |
N2B | 14480 | 43663;43664;43665 | chr2:178575499;178575498;178575497 | chr2:179440226;179440225;179440224 |
Novex-1 | 14605 | 44038;44039;44040 | chr2:178575499;178575498;178575497 | chr2:179440226;179440225;179440224 |
Novex-2 | 14672 | 44239;44240;44241 | chr2:178575499;178575498;178575497 | chr2:179440226;179440225;179440224 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.942 | D | 0.437 | 0.479 | 0.603539076606 | gnomAD-4.0.0 | 6.84245E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99536E-07 | 0 | 0 |
T/S | rs1247049807 | -1.204 | 0.006 | N | 0.157 | 0.068 | 0.154104182512 | gnomAD-4.0.0 | 6.84245E-07 | None | None | None | None | N | None | 0 | 2.23604E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.4051 | ambiguous | 0.3398 | benign | -0.848 | Destabilizing | 0.032 | N | 0.453 | neutral | N | 0.49454283 | None | None | N |
T/C | 0.8385 | likely_pathogenic | 0.8013 | pathogenic | -0.742 | Destabilizing | 0.995 | D | 0.46 | neutral | None | None | None | None | N |
T/D | 0.6451 | likely_pathogenic | 0.6322 | pathogenic | -1.012 | Destabilizing | 0.002 | N | 0.291 | neutral | None | None | None | None | N |
T/E | 0.7965 | likely_pathogenic | 0.7651 | pathogenic | -0.983 | Destabilizing | 0.521 | D | 0.415 | neutral | None | None | None | None | N |
T/F | 0.8985 | likely_pathogenic | 0.8645 | pathogenic | -0.889 | Destabilizing | 0.994 | D | 0.531 | neutral | None | None | None | None | N |
T/G | 0.299 | likely_benign | 0.2687 | benign | -1.124 | Destabilizing | 0.845 | D | 0.451 | neutral | None | None | None | None | N |
T/H | 0.6852 | likely_pathogenic | 0.6404 | pathogenic | -1.407 | Destabilizing | 0.996 | D | 0.52 | neutral | None | None | None | None | N |
T/I | 0.9467 | likely_pathogenic | 0.9297 | pathogenic | -0.195 | Destabilizing | 0.942 | D | 0.437 | neutral | D | 0.528891689 | None | None | N |
T/K | 0.6901 | likely_pathogenic | 0.6279 | pathogenic | -0.843 | Destabilizing | 0.752 | D | 0.407 | neutral | None | None | None | None | N |
T/L | 0.6295 | likely_pathogenic | 0.5526 | ambiguous | -0.195 | Destabilizing | 0.86 | D | 0.426 | neutral | None | None | None | None | N |
T/M | 0.4625 | ambiguous | 0.4086 | ambiguous | 0.112 | Stabilizing | 0.996 | D | 0.441 | neutral | None | None | None | None | N |
T/N | 0.3233 | likely_benign | 0.2996 | benign | -0.995 | Destabilizing | 0.197 | N | 0.421 | neutral | N | 0.475055769 | None | None | N |
T/P | 0.877 | likely_pathogenic | 0.8669 | pathogenic | -0.381 | Destabilizing | 0.778 | D | 0.443 | neutral | D | 0.528891689 | None | None | N |
T/Q | 0.6043 | likely_pathogenic | 0.5425 | ambiguous | -1.194 | Destabilizing | 0.91 | D | 0.441 | neutral | None | None | None | None | N |
T/R | 0.663 | likely_pathogenic | 0.5856 | pathogenic | -0.574 | Destabilizing | 0.983 | D | 0.434 | neutral | None | None | None | None | N |
T/S | 0.1373 | likely_benign | 0.1275 | benign | -1.189 | Destabilizing | 0.006 | N | 0.157 | neutral | N | 0.469458278 | None | None | N |
T/V | 0.8576 | likely_pathogenic | 0.8151 | pathogenic | -0.381 | Destabilizing | 0.815 | D | 0.427 | neutral | None | None | None | None | N |
T/W | 0.9589 | likely_pathogenic | 0.9497 | pathogenic | -0.851 | Destabilizing | 0.998 | D | 0.573 | neutral | None | None | None | None | N |
T/Y | 0.8738 | likely_pathogenic | 0.8383 | pathogenic | -0.578 | Destabilizing | 0.994 | D | 0.535 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.