Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23546 | 70861;70862;70863 | chr2:178575496;178575495;178575494 | chr2:179440223;179440222;179440221 |
N2AB | 21905 | 65938;65939;65940 | chr2:178575496;178575495;178575494 | chr2:179440223;179440222;179440221 |
N2A | 20978 | 63157;63158;63159 | chr2:178575496;178575495;178575494 | chr2:179440223;179440222;179440221 |
N2B | 14481 | 43666;43667;43668 | chr2:178575496;178575495;178575494 | chr2:179440223;179440222;179440221 |
Novex-1 | 14606 | 44041;44042;44043 | chr2:178575496;178575495;178575494 | chr2:179440223;179440222;179440221 |
Novex-2 | 14673 | 44242;44243;44244 | chr2:178575496;178575495;178575494 | chr2:179440223;179440222;179440221 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.027 | N | 0.274 | 0.094 | 0.210429274316 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3397 | likely_benign | 0.2893 | benign | -0.166 | Destabilizing | 0.001 | N | 0.105 | neutral | None | None | None | None | N |
K/C | 0.7143 | likely_pathogenic | 0.6719 | pathogenic | -0.24 | Destabilizing | 0.935 | D | 0.457 | neutral | None | None | None | None | N |
K/D | 0.6256 | likely_pathogenic | 0.5827 | pathogenic | -0.03 | Destabilizing | 0.001 | N | 0.169 | neutral | None | None | None | None | N |
K/E | 0.3085 | likely_benign | 0.2672 | benign | -0.021 | Destabilizing | 0.027 | N | 0.274 | neutral | N | 0.487443819 | None | None | N |
K/F | 0.9189 | likely_pathogenic | 0.8847 | pathogenic | -0.373 | Destabilizing | 0.555 | D | 0.475 | neutral | None | None | None | None | N |
K/G | 0.3696 | ambiguous | 0.3022 | benign | -0.397 | Destabilizing | 0.067 | N | 0.392 | neutral | None | None | None | None | N |
K/H | 0.3575 | ambiguous | 0.3236 | benign | -0.797 | Destabilizing | 0.555 | D | 0.407 | neutral | None | None | None | None | N |
K/I | 0.6895 | likely_pathogenic | 0.6116 | pathogenic | 0.37 | Stabilizing | 0.555 | D | 0.502 | neutral | None | None | None | None | N |
K/L | 0.5718 | likely_pathogenic | 0.4985 | ambiguous | 0.37 | Stabilizing | 0.149 | N | 0.411 | neutral | None | None | None | None | N |
K/M | 0.4779 | ambiguous | 0.4104 | ambiguous | 0.409 | Stabilizing | 0.741 | D | 0.4 | neutral | N | 0.495335616 | None | None | N |
K/N | 0.4844 | ambiguous | 0.4496 | ambiguous | 0.155 | Stabilizing | 0.117 | N | 0.319 | neutral | N | 0.491966991 | None | None | N |
K/P | 0.6409 | likely_pathogenic | 0.5529 | ambiguous | 0.221 | Stabilizing | 0.555 | D | 0.407 | neutral | None | None | None | None | N |
K/Q | 0.1745 | likely_benign | 0.1539 | benign | -0.124 | Destabilizing | 0.117 | N | 0.35 | neutral | N | 0.50774452 | None | None | N |
K/R | 0.0725 | likely_benign | 0.0693 | benign | -0.066 | Destabilizing | None | N | 0.06 | neutral | N | 0.448485573 | None | None | N |
K/S | 0.408 | ambiguous | 0.3522 | ambiguous | -0.418 | Destabilizing | 0.035 | N | 0.245 | neutral | None | None | None | None | N |
K/T | 0.3346 | likely_benign | 0.2881 | benign | -0.252 | Destabilizing | 0.117 | N | 0.351 | neutral | N | 0.520633673 | None | None | N |
K/V | 0.5801 | likely_pathogenic | 0.5094 | ambiguous | 0.221 | Stabilizing | 0.149 | N | 0.416 | neutral | None | None | None | None | N |
K/W | 0.8638 | likely_pathogenic | 0.8207 | pathogenic | -0.291 | Destabilizing | 0.935 | D | 0.598 | neutral | None | None | None | None | N |
K/Y | 0.7814 | likely_pathogenic | 0.7284 | pathogenic | 0.064 | Stabilizing | 0.555 | D | 0.458 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.