Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23547 | 70864;70865;70866 | chr2:178575493;178575492;178575491 | chr2:179440220;179440219;179440218 |
N2AB | 21906 | 65941;65942;65943 | chr2:178575493;178575492;178575491 | chr2:179440220;179440219;179440218 |
N2A | 20979 | 63160;63161;63162 | chr2:178575493;178575492;178575491 | chr2:179440220;179440219;179440218 |
N2B | 14482 | 43669;43670;43671 | chr2:178575493;178575492;178575491 | chr2:179440220;179440219;179440218 |
Novex-1 | 14607 | 44044;44045;44046 | chr2:178575493;178575492;178575491 | chr2:179440220;179440219;179440218 |
Novex-2 | 14674 | 44245;44246;44247 | chr2:178575493;178575492;178575491 | chr2:179440220;179440219;179440218 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs1553613338 | None | None | N | 0.079 | 0.043 | 0.0611884634855 | gnomAD-4.0.0 | 1.59151E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41429E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.129 | likely_benign | 0.1233 | benign | -0.726 | Destabilizing | 0.007 | N | 0.207 | neutral | None | None | None | None | I |
S/C | 0.1356 | likely_benign | 0.1473 | benign | -0.589 | Destabilizing | 0.828 | D | 0.344 | neutral | N | 0.499871975 | None | None | I |
S/D | 0.1995 | likely_benign | 0.2295 | benign | -0.61 | Destabilizing | None | N | 0.048 | neutral | None | None | None | None | I |
S/E | 0.408 | ambiguous | 0.4292 | ambiguous | -0.624 | Destabilizing | None | N | 0.071 | neutral | None | None | None | None | I |
S/F | 0.3254 | likely_benign | 0.3242 | benign | -0.988 | Destabilizing | 0.356 | N | 0.389 | neutral | None | None | None | None | I |
S/G | 0.0971 | likely_benign | 0.0967 | benign | -0.949 | Destabilizing | 0.012 | N | 0.215 | neutral | N | 0.504437643 | None | None | I |
S/H | 0.2137 | likely_benign | 0.2478 | benign | -1.453 | Destabilizing | 0.214 | N | 0.373 | neutral | None | None | None | None | I |
S/I | 0.3196 | likely_benign | 0.3248 | benign | -0.24 | Destabilizing | 0.055 | N | 0.452 | neutral | N | 0.481171835 | None | None | I |
S/K | 0.5001 | ambiguous | 0.5532 | ambiguous | -0.735 | Destabilizing | 0.016 | N | 0.225 | neutral | None | None | None | None | I |
S/L | 0.2066 | likely_benign | 0.1958 | benign | -0.24 | Destabilizing | 0.038 | N | 0.332 | neutral | None | None | None | None | I |
S/M | 0.2166 | likely_benign | 0.2166 | benign | 0.128 | Stabilizing | 0.628 | D | 0.365 | neutral | None | None | None | None | I |
S/N | 0.0672 | likely_benign | 0.0728 | benign | -0.708 | Destabilizing | None | N | 0.059 | neutral | N | 0.433766836 | None | None | I |
S/P | 0.8567 | likely_pathogenic | 0.8661 | pathogenic | -0.37 | Destabilizing | 0.136 | N | 0.393 | neutral | None | None | None | None | I |
S/Q | 0.3733 | ambiguous | 0.397 | ambiguous | -0.957 | Destabilizing | 0.072 | N | 0.241 | neutral | None | None | None | None | I |
S/R | 0.5024 | ambiguous | 0.537 | ambiguous | -0.561 | Destabilizing | 0.055 | N | 0.36 | neutral | N | 0.461262869 | None | None | I |
S/T | 0.0812 | likely_benign | 0.0824 | benign | -0.72 | Destabilizing | None | N | 0.079 | neutral | N | 0.426259287 | None | None | I |
S/V | 0.3164 | likely_benign | 0.3188 | benign | -0.37 | Destabilizing | 0.038 | N | 0.341 | neutral | None | None | None | None | I |
S/W | 0.4603 | ambiguous | 0.4673 | ambiguous | -0.946 | Destabilizing | 0.864 | D | 0.431 | neutral | None | None | None | None | I |
S/Y | 0.1862 | likely_benign | 0.2053 | benign | -0.676 | Destabilizing | 0.628 | D | 0.389 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.