Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23554 | 70885;70886;70887 | chr2:178575472;178575471;178575470 | chr2:179440199;179440198;179440197 |
N2AB | 21913 | 65962;65963;65964 | chr2:178575472;178575471;178575470 | chr2:179440199;179440198;179440197 |
N2A | 20986 | 63181;63182;63183 | chr2:178575472;178575471;178575470 | chr2:179440199;179440198;179440197 |
N2B | 14489 | 43690;43691;43692 | chr2:178575472;178575471;178575470 | chr2:179440199;179440198;179440197 |
Novex-1 | 14614 | 44065;44066;44067 | chr2:178575472;178575471;178575470 | chr2:179440199;179440198;179440197 |
Novex-2 | 14681 | 44266;44267;44268 | chr2:178575472;178575471;178575470 | chr2:179440199;179440198;179440197 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.309 | N | 0.447 | 0.135 | 0.166414681773 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1217 | likely_benign | 0.1334 | benign | -1.798 | Destabilizing | 0.028 | N | 0.22 | neutral | N | 0.397171318 | None | None | N |
P/C | 0.5655 | likely_pathogenic | 0.6202 | pathogenic | -1.212 | Destabilizing | 0.996 | D | 0.557 | neutral | None | None | None | None | N |
P/D | 0.5945 | likely_pathogenic | 0.5997 | pathogenic | -1.839 | Destabilizing | 0.59 | D | 0.436 | neutral | None | None | None | None | N |
P/E | 0.342 | ambiguous | 0.3523 | ambiguous | -1.76 | Destabilizing | 0.742 | D | 0.437 | neutral | None | None | None | None | N |
P/F | 0.6549 | likely_pathogenic | 0.677 | pathogenic | -1.238 | Destabilizing | 0.984 | D | 0.569 | neutral | None | None | None | None | N |
P/G | 0.3403 | ambiguous | 0.3679 | ambiguous | -2.205 | Highly Destabilizing | 0.373 | N | 0.493 | neutral | None | None | None | None | N |
P/H | 0.333 | likely_benign | 0.3503 | ambiguous | -1.725 | Destabilizing | 0.939 | D | 0.527 | neutral | N | 0.453179316 | None | None | N |
P/I | 0.3954 | ambiguous | 0.4157 | ambiguous | -0.739 | Destabilizing | 0.91 | D | 0.562 | neutral | None | None | None | None | N |
P/K | 0.4175 | ambiguous | 0.4398 | ambiguous | -1.563 | Destabilizing | 0.742 | D | 0.437 | neutral | None | None | None | None | N |
P/L | 0.1536 | likely_benign | 0.1665 | benign | -0.739 | Destabilizing | 0.684 | D | 0.524 | neutral | N | 0.404444007 | None | None | N |
P/M | 0.3385 | likely_benign | 0.3663 | ambiguous | -0.583 | Destabilizing | 0.996 | D | 0.522 | neutral | None | None | None | None | N |
P/N | 0.3853 | ambiguous | 0.4206 | ambiguous | -1.491 | Destabilizing | 0.009 | N | 0.37 | neutral | None | None | None | None | N |
P/Q | 0.2154 | likely_benign | 0.2319 | benign | -1.561 | Destabilizing | 0.91 | D | 0.503 | neutral | None | None | None | None | N |
P/R | 0.3214 | likely_benign | 0.3413 | ambiguous | -1.089 | Destabilizing | 0.884 | D | 0.546 | neutral | N | 0.378412199 | None | None | N |
P/S | 0.1905 | likely_benign | 0.2098 | benign | -2.055 | Highly Destabilizing | 0.309 | N | 0.447 | neutral | N | 0.363055957 | None | None | N |
P/T | 0.1326 | likely_benign | 0.1443 | benign | -1.85 | Destabilizing | 0.012 | N | 0.198 | neutral | N | 0.337448224 | None | None | N |
P/V | 0.2539 | likely_benign | 0.2718 | benign | -1.059 | Destabilizing | 0.742 | D | 0.508 | neutral | None | None | None | None | N |
P/W | 0.7808 | likely_pathogenic | 0.7897 | pathogenic | -1.526 | Destabilizing | 0.996 | D | 0.646 | neutral | None | None | None | None | N |
P/Y | 0.5903 | likely_pathogenic | 0.6115 | pathogenic | -1.212 | Destabilizing | 0.984 | D | 0.568 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.