Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23555 | 70888;70889;70890 | chr2:178575469;178575468;178575467 | chr2:179440196;179440195;179440194 |
N2AB | 21914 | 65965;65966;65967 | chr2:178575469;178575468;178575467 | chr2:179440196;179440195;179440194 |
N2A | 20987 | 63184;63185;63186 | chr2:178575469;178575468;178575467 | chr2:179440196;179440195;179440194 |
N2B | 14490 | 43693;43694;43695 | chr2:178575469;178575468;178575467 | chr2:179440196;179440195;179440194 |
Novex-1 | 14615 | 44068;44069;44070 | chr2:178575469;178575468;178575467 | chr2:179440196;179440195;179440194 |
Novex-2 | 14682 | 44269;44270;44271 | chr2:178575469;178575468;178575467 | chr2:179440196;179440195;179440194 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1246011660 | -0.545 | 0.009 | N | 0.395 | 0.144 | 0.323886383625 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
K/R | rs1246011660 | -0.545 | 0.009 | N | 0.395 | 0.144 | 0.323886383625 | gnomAD-4.0.0 | 1.59159E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85901E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8077 | likely_pathogenic | 0.801 | pathogenic | -0.446 | Destabilizing | 0.904 | D | 0.593 | neutral | None | None | None | None | N |
K/C | 0.9324 | likely_pathogenic | 0.9362 | pathogenic | -0.767 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
K/D | 0.9761 | likely_pathogenic | 0.9759 | pathogenic | -0.588 | Destabilizing | 0.971 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/E | 0.792 | likely_pathogenic | 0.7779 | pathogenic | -0.5 | Destabilizing | 0.681 | D | 0.571 | neutral | N | 0.490620197 | None | None | N |
K/F | 0.9635 | likely_pathogenic | 0.9685 | pathogenic | -0.474 | Destabilizing | 0.929 | D | 0.759 | deleterious | None | None | None | None | N |
K/G | 0.9218 | likely_pathogenic | 0.9202 | pathogenic | -0.686 | Destabilizing | 0.971 | D | 0.619 | neutral | None | None | None | None | N |
K/H | 0.7477 | likely_pathogenic | 0.7579 | pathogenic | -0.707 | Destabilizing | 0.991 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/I | 0.8065 | likely_pathogenic | 0.8071 | pathogenic | 0.15 | Stabilizing | 0.002 | N | 0.518 | neutral | None | None | None | None | N |
K/L | 0.739 | likely_pathogenic | 0.7489 | pathogenic | 0.15 | Stabilizing | 0.046 | N | 0.6 | neutral | None | None | None | None | N |
K/M | 0.7177 | likely_pathogenic | 0.7159 | pathogenic | -0.427 | Destabilizing | 0.918 | D | 0.695 | prob.neutral | N | 0.481523776 | None | None | N |
K/N | 0.952 | likely_pathogenic | 0.9501 | pathogenic | -0.512 | Destabilizing | 0.962 | D | 0.587 | neutral | N | 0.500677987 | None | None | N |
K/P | 0.7433 | likely_pathogenic | 0.7624 | pathogenic | -0.024 | Destabilizing | 0.995 | D | 0.704 | prob.neutral | None | None | None | None | N |
K/Q | 0.4917 | ambiguous | 0.4738 | ambiguous | -0.496 | Destabilizing | 0.752 | D | 0.599 | neutral | N | 0.498933036 | None | None | N |
K/R | 0.104 | likely_benign | 0.102 | benign | -0.263 | Destabilizing | 0.009 | N | 0.395 | neutral | N | 0.508917956 | None | None | N |
K/S | 0.918 | likely_pathogenic | 0.9162 | pathogenic | -0.882 | Destabilizing | 0.904 | D | 0.577 | neutral | None | None | None | None | N |
K/T | 0.8019 | likely_pathogenic | 0.7929 | pathogenic | -0.626 | Destabilizing | 0.882 | D | 0.643 | neutral | N | 0.513939774 | None | None | N |
K/V | 0.7308 | likely_pathogenic | 0.73 | pathogenic | -0.024 | Destabilizing | 0.059 | N | 0.604 | neutral | None | None | None | None | N |
K/W | 0.9582 | likely_pathogenic | 0.965 | pathogenic | -0.548 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | N |
K/Y | 0.9204 | likely_pathogenic | 0.9283 | pathogenic | -0.233 | Destabilizing | 0.758 | D | 0.754 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.