Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23564 | 70915;70916;70917 | chr2:178575442;178575441;178575440 | chr2:179440169;179440168;179440167 |
N2AB | 21923 | 65992;65993;65994 | chr2:178575442;178575441;178575440 | chr2:179440169;179440168;179440167 |
N2A | 20996 | 63211;63212;63213 | chr2:178575442;178575441;178575440 | chr2:179440169;179440168;179440167 |
N2B | 14499 | 43720;43721;43722 | chr2:178575442;178575441;178575440 | chr2:179440169;179440168;179440167 |
Novex-1 | 14624 | 44095;44096;44097 | chr2:178575442;178575441;178575440 | chr2:179440169;179440168;179440167 |
Novex-2 | 14691 | 44296;44297;44298 | chr2:178575442;178575441;178575440 | chr2:179440169;179440168;179440167 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 1.0 | D | 0.833 | 0.543 | 0.654604268507 | gnomAD-4.0.0 | 1.5917E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85927E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9742 | likely_pathogenic | 0.9743 | pathogenic | -2.284 | Highly Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | I |
I/C | 0.9775 | likely_pathogenic | 0.9796 | pathogenic | -1.448 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | I |
I/D | 0.9958 | likely_pathogenic | 0.9958 | pathogenic | -1.897 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
I/E | 0.9901 | likely_pathogenic | 0.9903 | pathogenic | -1.813 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
I/F | 0.9279 | likely_pathogenic | 0.9348 | pathogenic | -1.549 | Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.523055566 | None | None | I |
I/G | 0.9936 | likely_pathogenic | 0.994 | pathogenic | -2.712 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
I/H | 0.9927 | likely_pathogenic | 0.9936 | pathogenic | -1.922 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
I/K | 0.9877 | likely_pathogenic | 0.9883 | pathogenic | -1.578 | Destabilizing | 0.998 | D | 0.859 | deleterious | None | None | None | None | I |
I/L | 0.4797 | ambiguous | 0.5186 | ambiguous | -1.116 | Destabilizing | 0.955 | D | 0.414 | neutral | N | 0.482719225 | None | None | I |
I/M | 0.5601 | ambiguous | 0.5696 | pathogenic | -0.843 | Destabilizing | 0.999 | D | 0.809 | deleterious | D | 0.543694716 | None | None | I |
I/N | 0.8442 | likely_pathogenic | 0.843 | pathogenic | -1.505 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.537960724 | None | None | I |
I/P | 0.9614 | likely_pathogenic | 0.9664 | pathogenic | -1.479 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
I/Q | 0.9891 | likely_pathogenic | 0.99 | pathogenic | -1.603 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
I/R | 0.9847 | likely_pathogenic | 0.9859 | pathogenic | -1.022 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
I/S | 0.9666 | likely_pathogenic | 0.9668 | pathogenic | -2.222 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | D | 0.537200256 | None | None | I |
I/T | 0.9438 | likely_pathogenic | 0.9445 | pathogenic | -2.007 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | N | 0.52107101 | None | None | I |
I/V | 0.1398 | likely_benign | 0.1498 | benign | -1.479 | Destabilizing | 0.966 | D | 0.4 | neutral | N | 0.509056816 | None | None | I |
I/W | 0.9975 | likely_pathogenic | 0.9977 | pathogenic | -1.707 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
I/Y | 0.9807 | likely_pathogenic | 0.9816 | pathogenic | -1.492 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.