Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23571 | 70936;70937;70938 | chr2:178575421;178575420;178575419 | chr2:179440148;179440147;179440146 |
N2AB | 21930 | 66013;66014;66015 | chr2:178575421;178575420;178575419 | chr2:179440148;179440147;179440146 |
N2A | 21003 | 63232;63233;63234 | chr2:178575421;178575420;178575419 | chr2:179440148;179440147;179440146 |
N2B | 14506 | 43741;43742;43743 | chr2:178575421;178575420;178575419 | chr2:179440148;179440147;179440146 |
Novex-1 | 14631 | 44116;44117;44118 | chr2:178575421;178575420;178575419 | chr2:179440148;179440147;179440146 |
Novex-2 | 14698 | 44317;44318;44319 | chr2:178575421;178575420;178575419 | chr2:179440148;179440147;179440146 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.971 | N | 0.685 | 0.21 | 0.246773566709 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4968 | ambiguous | 0.4729 | ambiguous | -0.662 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | N |
A/D | 0.9551 | likely_pathogenic | 0.9446 | pathogenic | -2.248 | Highly Destabilizing | 0.942 | D | 0.767 | deleterious | N | 0.490144603 | None | None | N |
A/E | 0.8291 | likely_pathogenic | 0.8154 | pathogenic | -1.99 | Destabilizing | 0.978 | D | 0.721 | prob.delet. | None | None | None | None | N |
A/F | 0.5272 | ambiguous | 0.442 | ambiguous | -0.408 | Destabilizing | 0.915 | D | 0.762 | deleterious | None | None | None | None | N |
A/G | 0.2224 | likely_benign | 0.2085 | benign | -1.352 | Destabilizing | 0.014 | N | 0.384 | neutral | N | 0.505301648 | None | None | N |
A/H | 0.8399 | likely_pathogenic | 0.8111 | pathogenic | -1.973 | Destabilizing | 0.988 | D | 0.765 | deleterious | None | None | None | None | N |
A/I | 0.4556 | ambiguous | 0.3934 | ambiguous | 0.566 | Stabilizing | 0.956 | D | 0.737 | prob.delet. | None | None | None | None | N |
A/K | 0.8756 | likely_pathogenic | 0.8687 | pathogenic | -0.718 | Destabilizing | 0.956 | D | 0.721 | prob.delet. | None | None | None | None | N |
A/L | 0.3262 | likely_benign | 0.2892 | benign | 0.566 | Stabilizing | 0.754 | D | 0.706 | prob.neutral | None | None | None | None | N |
A/M | 0.286 | likely_benign | 0.2594 | benign | 0.175 | Stabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | N |
A/N | 0.8257 | likely_pathogenic | 0.7912 | pathogenic | -1.189 | Destabilizing | 0.956 | D | 0.752 | deleterious | None | None | None | None | N |
A/P | 0.9901 | likely_pathogenic | 0.9881 | pathogenic | 0.137 | Stabilizing | 0.99 | D | 0.724 | prob.delet. | N | 0.508533954 | None | None | N |
A/Q | 0.6894 | likely_pathogenic | 0.688 | pathogenic | -0.867 | Destabilizing | 0.978 | D | 0.726 | prob.delet. | None | None | None | None | N |
A/R | 0.8198 | likely_pathogenic | 0.8165 | pathogenic | -1.072 | Destabilizing | 0.978 | D | 0.725 | prob.delet. | None | None | None | None | N |
A/S | 0.198 | likely_benign | 0.1766 | benign | -1.527 | Destabilizing | 0.822 | D | 0.595 | neutral | N | 0.483232865 | None | None | N |
A/T | 0.2317 | likely_benign | 0.1897 | benign | -1.141 | Destabilizing | 0.971 | D | 0.685 | prob.neutral | N | 0.496623449 | None | None | N |
A/V | 0.2416 | likely_benign | 0.2 | benign | 0.137 | Stabilizing | 0.822 | D | 0.649 | neutral | N | 0.458969138 | None | None | N |
A/W | 0.8775 | likely_pathogenic | 0.8607 | pathogenic | -1.312 | Destabilizing | 0.994 | D | 0.807 | deleterious | None | None | None | None | N |
A/Y | 0.6399 | likely_pathogenic | 0.5889 | pathogenic | -0.69 | Destabilizing | 0.043 | N | 0.666 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.