Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23581 | 70966;70967;70968 | chr2:178575391;178575390;178575389 | chr2:179440118;179440117;179440116 |
N2AB | 21940 | 66043;66044;66045 | chr2:178575391;178575390;178575389 | chr2:179440118;179440117;179440116 |
N2A | 21013 | 63262;63263;63264 | chr2:178575391;178575390;178575389 | chr2:179440118;179440117;179440116 |
N2B | 14516 | 43771;43772;43773 | chr2:178575391;178575390;178575389 | chr2:179440118;179440117;179440116 |
Novex-1 | 14641 | 44146;44147;44148 | chr2:178575391;178575390;178575389 | chr2:179440118;179440117;179440116 |
Novex-2 | 14708 | 44347;44348;44349 | chr2:178575391;178575390;178575389 | chr2:179440118;179440117;179440116 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.521 | N | 0.472 | 0.291 | 0.242244723065 | gnomAD-4.0.0 | 1.59172E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85892E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2524 | likely_benign | 0.3461 | ambiguous | -0.22 | Destabilizing | 0.59 | D | 0.522 | neutral | None | None | None | None | N |
H/C | 0.2343 | likely_benign | 0.267 | benign | 0.363 | Stabilizing | 0.996 | D | 0.611 | neutral | None | None | None | None | N |
H/D | 0.389 | ambiguous | 0.4645 | ambiguous | -0.018 | Destabilizing | 0.684 | D | 0.525 | neutral | N | 0.455643618 | None | None | N |
H/E | 0.391 | ambiguous | 0.459 | ambiguous | 0.02 | Stabilizing | 0.59 | D | 0.451 | neutral | None | None | None | None | N |
H/F | 0.355 | ambiguous | 0.4071 | ambiguous | 0.529 | Stabilizing | 0.984 | D | 0.569 | neutral | None | None | None | None | N |
H/G | 0.4019 | ambiguous | 0.4828 | ambiguous | -0.519 | Destabilizing | 0.742 | D | 0.521 | neutral | None | None | None | None | N |
H/I | 0.3448 | ambiguous | 0.4031 | ambiguous | 0.557 | Stabilizing | 0.953 | D | 0.589 | neutral | None | None | None | None | N |
H/K | 0.3788 | ambiguous | 0.4315 | ambiguous | -0.214 | Destabilizing | 0.009 | N | 0.389 | neutral | None | None | None | None | N |
H/L | 0.1423 | likely_benign | 0.1763 | benign | 0.557 | Stabilizing | 0.684 | D | 0.545 | neutral | N | 0.416202583 | None | None | N |
H/M | 0.47 | ambiguous | 0.5327 | ambiguous | 0.417 | Stabilizing | 0.996 | D | 0.578 | neutral | None | None | None | None | N |
H/N | 0.138 | likely_benign | 0.1698 | benign | -0.148 | Destabilizing | 0.684 | D | 0.487 | neutral | N | 0.461761514 | None | None | N |
H/P | 0.1147 | likely_benign | 0.1517 | benign | 0.322 | Stabilizing | 0.007 | N | 0.396 | neutral | N | 0.417298661 | None | None | N |
H/Q | 0.2475 | likely_benign | 0.3038 | benign | -0.035 | Destabilizing | 0.884 | D | 0.509 | neutral | N | 0.450544443 | None | None | N |
H/R | 0.1651 | likely_benign | 0.1975 | benign | -0.663 | Destabilizing | 0.521 | D | 0.472 | neutral | N | 0.417143945 | None | None | N |
H/S | 0.261 | likely_benign | 0.3376 | benign | -0.176 | Destabilizing | 0.742 | D | 0.493 | neutral | None | None | None | None | N |
H/T | 0.2846 | likely_benign | 0.3622 | ambiguous | -0.041 | Destabilizing | 0.742 | D | 0.555 | neutral | None | None | None | None | N |
H/V | 0.2567 | likely_benign | 0.3124 | benign | 0.322 | Stabilizing | 0.91 | D | 0.545 | neutral | None | None | None | None | N |
H/W | 0.5131 | ambiguous | 0.5312 | ambiguous | 0.649 | Stabilizing | 0.996 | D | 0.643 | neutral | None | None | None | None | N |
H/Y | 0.1351 | likely_benign | 0.1623 | benign | 0.88 | Stabilizing | 0.979 | D | 0.509 | neutral | N | 0.48983355 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.