Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23582 | 70969;70970;70971 | chr2:178575388;178575387;178575386 | chr2:179440115;179440114;179440113 |
N2AB | 21941 | 66046;66047;66048 | chr2:178575388;178575387;178575386 | chr2:179440115;179440114;179440113 |
N2A | 21014 | 63265;63266;63267 | chr2:178575388;178575387;178575386 | chr2:179440115;179440114;179440113 |
N2B | 14517 | 43774;43775;43776 | chr2:178575388;178575387;178575386 | chr2:179440115;179440114;179440113 |
Novex-1 | 14642 | 44149;44150;44151 | chr2:178575388;178575387;178575386 | chr2:179440115;179440114;179440113 |
Novex-2 | 14709 | 44350;44351;44352 | chr2:178575388;178575387;178575386 | chr2:179440115;179440114;179440113 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs1305914437 | -0.681 | 0.016 | N | 0.322 | 0.115 | 0.417586769301 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/L | rs1305914437 | -0.681 | 0.016 | N | 0.322 | 0.115 | 0.417586769301 | gnomAD-4.0.0 | 3.18338E-06 | None | None | None | None | N | None | 5.65739E-05 | 0 | None | 0 | 2.77855E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5399 | ambiguous | 0.5052 | ambiguous | -1.418 | Destabilizing | 0.25 | N | 0.485 | neutral | None | None | None | None | N |
I/C | 0.6349 | likely_pathogenic | 0.6369 | pathogenic | -0.764 | Destabilizing | 0.992 | D | 0.554 | neutral | None | None | None | None | N |
I/D | 0.9245 | likely_pathogenic | 0.9186 | pathogenic | -1.011 | Destabilizing | 0.972 | D | 0.608 | neutral | None | None | None | None | N |
I/E | 0.859 | likely_pathogenic | 0.8412 | pathogenic | -1.04 | Destabilizing | 0.92 | D | 0.611 | neutral | None | None | None | None | N |
I/F | 0.2177 | likely_benign | 0.2076 | benign | -1.078 | Destabilizing | 0.004 | N | 0.316 | neutral | N | 0.469802207 | None | None | N |
I/G | 0.8515 | likely_pathogenic | 0.8281 | pathogenic | -1.699 | Destabilizing | 0.766 | D | 0.566 | neutral | None | None | None | None | N |
I/H | 0.7301 | likely_pathogenic | 0.7325 | pathogenic | -0.887 | Destabilizing | 0.992 | D | 0.603 | neutral | None | None | None | None | N |
I/K | 0.7294 | likely_pathogenic | 0.7338 | pathogenic | -0.997 | Destabilizing | 0.85 | D | 0.601 | neutral | None | None | None | None | N |
I/L | 0.1252 | likely_benign | 0.1334 | benign | -0.736 | Destabilizing | 0.016 | N | 0.322 | neutral | N | 0.422837767 | None | None | N |
I/M | 0.1296 | likely_benign | 0.1285 | benign | -0.521 | Destabilizing | 0.016 | N | 0.215 | neutral | N | 0.474037378 | None | None | N |
I/N | 0.6348 | likely_pathogenic | 0.5929 | pathogenic | -0.775 | Destabilizing | 0.896 | D | 0.609 | neutral | N | 0.5113049 | None | None | N |
I/P | 0.9523 | likely_pathogenic | 0.9443 | pathogenic | -0.931 | Destabilizing | 0.972 | D | 0.609 | neutral | None | None | None | None | N |
I/Q | 0.7155 | likely_pathogenic | 0.7136 | pathogenic | -0.986 | Destabilizing | 0.92 | D | 0.608 | neutral | None | None | None | None | N |
I/R | 0.6518 | likely_pathogenic | 0.6535 | pathogenic | -0.338 | Destabilizing | 0.85 | D | 0.611 | neutral | None | None | None | None | N |
I/S | 0.5837 | likely_pathogenic | 0.548 | ambiguous | -1.295 | Destabilizing | 0.549 | D | 0.546 | neutral | N | 0.440847524 | None | None | N |
I/T | 0.4874 | ambiguous | 0.4559 | ambiguous | -1.211 | Destabilizing | 0.549 | D | 0.511 | neutral | N | 0.45583562 | None | None | N |
I/V | 0.0784 | likely_benign | 0.0721 | benign | -0.931 | Destabilizing | 0.001 | N | 0.159 | neutral | N | 0.353516541 | None | None | N |
I/W | 0.8756 | likely_pathogenic | 0.8832 | pathogenic | -1.137 | Destabilizing | 0.992 | D | 0.609 | neutral | None | None | None | None | N |
I/Y | 0.6374 | likely_pathogenic | 0.6255 | pathogenic | -0.92 | Destabilizing | 0.739 | D | 0.562 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.