Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23587 | 70984;70985;70986 | chr2:178575373;178575372;178575371 | chr2:179440100;179440099;179440098 |
N2AB | 21946 | 66061;66062;66063 | chr2:178575373;178575372;178575371 | chr2:179440100;179440099;179440098 |
N2A | 21019 | 63280;63281;63282 | chr2:178575373;178575372;178575371 | chr2:179440100;179440099;179440098 |
N2B | 14522 | 43789;43790;43791 | chr2:178575373;178575372;178575371 | chr2:179440100;179440099;179440098 |
Novex-1 | 14647 | 44164;44165;44166 | chr2:178575373;178575372;178575371 | chr2:179440100;179440099;179440098 |
Novex-2 | 14714 | 44365;44366;44367 | chr2:178575373;178575372;178575371 | chr2:179440100;179440099;179440098 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.055 | N | 0.365 | 0.137 | 0.317084106153 | gnomAD-4.0.0 | 2.7372E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59816E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0807 | likely_benign | 0.0856 | benign | -0.333 | Destabilizing | None | N | 0.105 | neutral | N | 0.411716696 | None | None | N |
G/C | 0.1834 | likely_benign | 0.1897 | benign | -0.443 | Destabilizing | 0.676 | D | 0.381 | neutral | None | None | None | None | N |
G/D | 0.2161 | likely_benign | 0.209 | benign | -0.699 | Destabilizing | 0.038 | N | 0.299 | neutral | None | None | None | None | N |
G/E | 0.2213 | likely_benign | 0.2132 | benign | -0.658 | Destabilizing | 0.055 | N | 0.299 | neutral | N | 0.451581806 | None | None | N |
G/F | 0.4458 | ambiguous | 0.4649 | ambiguous | -0.545 | Destabilizing | 0.356 | N | 0.399 | neutral | None | None | None | None | N |
G/H | 0.352 | ambiguous | 0.3562 | ambiguous | -0.815 | Destabilizing | 0.356 | N | 0.354 | neutral | None | None | None | None | N |
G/I | 0.2064 | likely_benign | 0.2209 | benign | 0.233 | Stabilizing | 0.214 | N | 0.388 | neutral | None | None | None | None | N |
G/K | 0.4909 | ambiguous | 0.4855 | ambiguous | -0.626 | Destabilizing | 0.072 | N | 0.31 | neutral | None | None | None | None | N |
G/L | 0.2567 | likely_benign | 0.2764 | benign | 0.233 | Stabilizing | 0.038 | N | 0.333 | neutral | None | None | None | None | N |
G/M | 0.2827 | likely_benign | 0.306 | benign | -0.033 | Destabilizing | 0.356 | N | 0.382 | neutral | None | None | None | None | N |
G/N | 0.1586 | likely_benign | 0.1635 | benign | -0.567 | Destabilizing | None | N | 0.11 | neutral | None | None | None | None | N |
G/P | 0.6926 | likely_pathogenic | 0.731 | pathogenic | 0.085 | Stabilizing | 0.214 | N | 0.371 | neutral | None | None | None | None | N |
G/Q | 0.309 | likely_benign | 0.3111 | benign | -0.579 | Destabilizing | 0.214 | N | 0.365 | neutral | None | None | None | None | N |
G/R | 0.4328 | ambiguous | 0.416 | ambiguous | -0.523 | Destabilizing | 0.055 | N | 0.365 | neutral | N | 0.452813957 | None | None | N |
G/S | 0.0748 | likely_benign | 0.0774 | benign | -0.869 | Destabilizing | None | N | 0.116 | neutral | None | None | None | None | N |
G/T | 0.0874 | likely_benign | 0.0947 | benign | -0.718 | Destabilizing | 0.001 | N | 0.253 | neutral | None | None | None | None | N |
G/V | 0.1282 | likely_benign | 0.1372 | benign | 0.085 | Stabilizing | 0.029 | N | 0.344 | neutral | N | 0.441076811 | None | None | N |
G/W | 0.4419 | ambiguous | 0.4267 | ambiguous | -1.027 | Destabilizing | 0.828 | D | 0.402 | neutral | N | 0.492195291 | None | None | N |
G/Y | 0.3513 | ambiguous | 0.3501 | ambiguous | -0.46 | Destabilizing | 0.356 | N | 0.403 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.