Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23588 | 70987;70988;70989 | chr2:178575370;178575369;178575368 | chr2:179440097;179440096;179440095 |
N2AB | 21947 | 66064;66065;66066 | chr2:178575370;178575369;178575368 | chr2:179440097;179440096;179440095 |
N2A | 21020 | 63283;63284;63285 | chr2:178575370;178575369;178575368 | chr2:179440097;179440096;179440095 |
N2B | 14523 | 43792;43793;43794 | chr2:178575370;178575369;178575368 | chr2:179440097;179440096;179440095 |
Novex-1 | 14648 | 44167;44168;44169 | chr2:178575370;178575369;178575368 | chr2:179440097;179440096;179440095 |
Novex-2 | 14715 | 44368;44369;44370 | chr2:178575370;178575369;178575368 | chr2:179440097;179440096;179440095 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 1.0 | N | 0.761 | 0.531 | 0.675944014053 | gnomAD-4.0.0 | 4.79008E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39724E-06 | 0 | 1.65684E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3488 | ambiguous | 0.3474 | ambiguous | -1.717 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
L/C | 0.5538 | ambiguous | 0.5901 | pathogenic | -0.908 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
L/D | 0.8507 | likely_pathogenic | 0.8528 | pathogenic | -1.634 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/E | 0.5458 | ambiguous | 0.5404 | ambiguous | -1.483 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
L/F | 0.2839 | likely_benign | 0.3134 | benign | -0.99 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.470647996 | None | None | N |
L/G | 0.6101 | likely_pathogenic | 0.6221 | pathogenic | -2.143 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
L/H | 0.459 | ambiguous | 0.4771 | ambiguous | -1.321 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
L/I | 0.214 | likely_benign | 0.2035 | benign | -0.54 | Destabilizing | 0.999 | D | 0.431 | neutral | N | 0.468735438 | None | None | N |
L/K | 0.4389 | ambiguous | 0.456 | ambiguous | -1.146 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
L/M | 0.1114 | likely_benign | 0.1193 | benign | -0.473 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
L/N | 0.4388 | ambiguous | 0.458 | ambiguous | -1.354 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
L/P | 0.2373 | likely_benign | 0.2722 | benign | -0.908 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
L/Q | 0.2289 | likely_benign | 0.2422 | benign | -1.33 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/R | 0.3714 | ambiguous | 0.3823 | ambiguous | -0.783 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
L/S | 0.3964 | ambiguous | 0.3951 | ambiguous | -1.971 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.521884466 | None | None | N |
L/T | 0.1824 | likely_benign | 0.1821 | benign | -1.686 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
L/V | 0.176 | likely_benign | 0.1737 | benign | -0.908 | Destabilizing | 0.999 | D | 0.475 | neutral | N | 0.516286646 | None | None | N |
L/W | 0.4846 | ambiguous | 0.4925 | ambiguous | -1.24 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
L/Y | 0.6102 | likely_pathogenic | 0.6408 | pathogenic | -0.902 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.