Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2359 | 7300;7301;7302 | chr2:178774093;178774092;178774091 | chr2:179638820;179638819;179638818 |
N2AB | 2359 | 7300;7301;7302 | chr2:178774093;178774092;178774091 | chr2:179638820;179638819;179638818 |
N2A | 2359 | 7300;7301;7302 | chr2:178774093;178774092;178774091 | chr2:179638820;179638819;179638818 |
N2B | 2313 | 7162;7163;7164 | chr2:178774093;178774092;178774091 | chr2:179638820;179638819;179638818 |
Novex-1 | 2313 | 7162;7163;7164 | chr2:178774093;178774092;178774091 | chr2:179638820;179638819;179638818 |
Novex-2 | 2313 | 7162;7163;7164 | chr2:178774093;178774092;178774091 | chr2:179638820;179638819;179638818 |
Novex-3 | 2359 | 7300;7301;7302 | chr2:178774093;178774092;178774091 | chr2:179638820;179638819;179638818 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.999 | D | 0.626 | 0.871 | 0.911129948677 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 1.26695E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4317 | ambiguous | 0.4154 | ambiguous | -0.967 | Destabilizing | 0.983 | D | 0.391 | neutral | None | None | None | None | I |
L/C | 0.6571 | likely_pathogenic | 0.6526 | pathogenic | -0.755 | Destabilizing | 1.0 | D | 0.455 | neutral | None | None | None | None | I |
L/D | 0.8843 | likely_pathogenic | 0.8671 | pathogenic | -0.412 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | I |
L/E | 0.5462 | ambiguous | 0.4887 | ambiguous | -0.475 | Destabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | I |
L/F | 0.1485 | likely_benign | 0.1446 | benign | -0.732 | Destabilizing | 0.995 | D | 0.401 | neutral | None | None | None | None | I |
L/G | 0.7534 | likely_pathogenic | 0.7312 | pathogenic | -1.184 | Destabilizing | 0.998 | D | 0.626 | neutral | None | None | None | None | I |
L/H | 0.3311 | likely_benign | 0.3108 | benign | -0.318 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | I |
L/I | 0.0877 | likely_benign | 0.0907 | benign | -0.493 | Destabilizing | 0.956 | D | 0.358 | neutral | D | 0.531571177 | None | None | I |
L/K | 0.4812 | ambiguous | 0.4297 | ambiguous | -0.651 | Destabilizing | 0.998 | D | 0.506 | neutral | None | None | None | None | I |
L/M | 0.1135 | likely_benign | 0.1142 | benign | -0.477 | Destabilizing | 0.693 | D | 0.162 | neutral | None | None | None | None | I |
L/N | 0.5663 | likely_pathogenic | 0.5559 | ambiguous | -0.488 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | I |
L/P | 0.8618 | likely_pathogenic | 0.8592 | pathogenic | -0.617 | Destabilizing | 0.999 | D | 0.626 | neutral | D | 0.593097117 | None | None | I |
L/Q | 0.2078 | likely_benign | 0.1829 | benign | -0.708 | Destabilizing | 0.997 | D | 0.548 | neutral | D | 0.593097117 | None | None | I |
L/R | 0.3863 | ambiguous | 0.3252 | benign | -0.019 | Destabilizing | 0.997 | D | 0.561 | neutral | D | 0.542289307 | None | None | I |
L/S | 0.4326 | ambiguous | 0.4079 | ambiguous | -0.999 | Destabilizing | 0.998 | D | 0.482 | neutral | None | None | None | None | I |
L/T | 0.2769 | likely_benign | 0.2682 | benign | -0.953 | Destabilizing | 0.998 | D | 0.415 | neutral | None | None | None | None | I |
L/V | 0.1005 | likely_benign | 0.1013 | benign | -0.617 | Destabilizing | 0.9 | D | 0.415 | neutral | N | 0.497581761 | None | None | I |
L/W | 0.3805 | ambiguous | 0.3501 | ambiguous | -0.739 | Destabilizing | 1.0 | D | 0.601 | neutral | None | None | None | None | I |
L/Y | 0.445 | ambiguous | 0.4309 | ambiguous | -0.521 | Destabilizing | 0.999 | D | 0.424 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.