Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23590 | 70993;70994;70995 | chr2:178575364;178575363;178575362 | chr2:179440091;179440090;179440089 |
N2AB | 21949 | 66070;66071;66072 | chr2:178575364;178575363;178575362 | chr2:179440091;179440090;179440089 |
N2A | 21022 | 63289;63290;63291 | chr2:178575364;178575363;178575362 | chr2:179440091;179440090;179440089 |
N2B | 14525 | 43798;43799;43800 | chr2:178575364;178575363;178575362 | chr2:179440091;179440090;179440089 |
Novex-1 | 14650 | 44173;44174;44175 | chr2:178575364;178575363;178575362 | chr2:179440091;179440090;179440089 |
Novex-2 | 14717 | 44374;44375;44376 | chr2:178575364;178575363;178575362 | chr2:179440091;179440090;179440089 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | None | None | 0.784 | N | 0.603 | 0.424 | 0.574465425021 | gnomAD-4.0.0 | 1.59171E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02444E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.3431 | ambiguous | 0.3406 | ambiguous | -1.532 | Destabilizing | 0.495 | N | 0.369 | neutral | None | None | None | None | N |
C/D | 0.8514 | likely_pathogenic | 0.8407 | pathogenic | 0.195 | Stabilizing | 0.981 | D | 0.702 | prob.neutral | None | None | None | None | N |
C/E | 0.8851 | likely_pathogenic | 0.8748 | pathogenic | 0.315 | Stabilizing | 0.944 | D | 0.709 | prob.delet. | None | None | None | None | N |
C/F | 0.1795 | likely_benign | 0.1819 | benign | -0.926 | Destabilizing | 0.002 | N | 0.467 | neutral | N | 0.445058479 | None | None | N |
C/G | 0.2343 | likely_benign | 0.2217 | benign | -1.842 | Destabilizing | 0.784 | D | 0.647 | neutral | N | 0.501818625 | None | None | N |
C/H | 0.5328 | ambiguous | 0.5218 | ambiguous | -1.672 | Destabilizing | 0.893 | D | 0.67 | neutral | None | None | None | None | N |
C/I | 0.5137 | ambiguous | 0.4892 | ambiguous | -0.739 | Destabilizing | 0.704 | D | 0.598 | neutral | None | None | None | None | N |
C/K | 0.9015 | likely_pathogenic | 0.8946 | pathogenic | -0.496 | Destabilizing | 0.828 | D | 0.711 | prob.delet. | None | None | None | None | N |
C/L | 0.4531 | ambiguous | 0.4401 | ambiguous | -0.739 | Destabilizing | 0.329 | N | 0.581 | neutral | None | None | None | None | N |
C/M | 0.533 | ambiguous | 0.5371 | ambiguous | 0.067 | Stabilizing | 0.981 | D | 0.606 | neutral | None | None | None | None | N |
C/N | 0.6163 | likely_pathogenic | 0.5963 | pathogenic | -0.637 | Destabilizing | 0.944 | D | 0.675 | prob.neutral | None | None | None | None | N |
C/P | 0.993 | likely_pathogenic | 0.9919 | pathogenic | -0.977 | Destabilizing | 0.981 | D | 0.677 | prob.neutral | None | None | None | None | N |
C/Q | 0.7697 | likely_pathogenic | 0.7572 | pathogenic | -0.446 | Destabilizing | 0.981 | D | 0.677 | prob.neutral | None | None | None | None | N |
C/R | 0.7163 | likely_pathogenic | 0.6936 | pathogenic | -0.464 | Destabilizing | 0.927 | D | 0.68 | prob.neutral | N | 0.4721028 | None | None | N |
C/S | 0.3551 | ambiguous | 0.3467 | ambiguous | -1.211 | Destabilizing | 0.784 | D | 0.603 | neutral | N | 0.516729363 | None | None | N |
C/T | 0.4291 | ambiguous | 0.4234 | ambiguous | -0.889 | Destabilizing | 0.828 | D | 0.608 | neutral | None | None | None | None | N |
C/V | 0.4086 | ambiguous | 0.3915 | ambiguous | -0.977 | Destabilizing | 0.495 | N | 0.54 | neutral | None | None | None | None | N |
C/W | 0.5653 | likely_pathogenic | 0.5693 | pathogenic | -0.906 | Destabilizing | 0.927 | D | 0.611 | neutral | N | 0.468481949 | None | None | N |
C/Y | 0.2142 | likely_benign | 0.2154 | benign | -0.865 | Destabilizing | 0.001 | N | 0.449 | neutral | N | 0.413367348 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.