Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23594 | 71005;71006;71007 | chr2:178575352;178575351;178575350 | chr2:179440079;179440078;179440077 |
N2AB | 21953 | 66082;66083;66084 | chr2:178575352;178575351;178575350 | chr2:179440079;179440078;179440077 |
N2A | 21026 | 63301;63302;63303 | chr2:178575352;178575351;178575350 | chr2:179440079;179440078;179440077 |
N2B | 14529 | 43810;43811;43812 | chr2:178575352;178575351;178575350 | chr2:179440079;179440078;179440077 |
Novex-1 | 14654 | 44185;44186;44187 | chr2:178575352;178575351;178575350 | chr2:179440079;179440078;179440077 |
Novex-2 | 14721 | 44386;44387;44388 | chr2:178575352;178575351;178575350 | chr2:179440079;179440078;179440077 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | None | N | 0.081 | 0.106 | 0.195762928549 | gnomAD-4.0.0 | 6.84314E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99546E-07 | 0 | 0 |
N/Y | None | None | 0.602 | N | 0.405 | 0.344 | 0.424670345773 | gnomAD-4.0.0 | 6.84314E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15942E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2942 | likely_benign | 0.3073 | benign | -0.095 | Destabilizing | 0.055 | N | 0.326 | neutral | None | None | None | None | N |
N/C | 0.4193 | ambiguous | 0.4427 | ambiguous | 0.171 | Stabilizing | 0.883 | D | 0.389 | neutral | None | None | None | None | N |
N/D | 0.1357 | likely_benign | 0.138 | benign | 0.176 | Stabilizing | None | N | 0.081 | neutral | N | 0.456064906 | None | None | N |
N/E | 0.3858 | ambiguous | 0.3928 | ambiguous | 0.116 | Stabilizing | 0.004 | N | 0.11 | neutral | None | None | None | None | N |
N/F | 0.6169 | likely_pathogenic | 0.63 | pathogenic | -0.698 | Destabilizing | 0.667 | D | 0.435 | neutral | None | None | None | None | N |
N/G | 0.2227 | likely_benign | 0.2353 | benign | -0.191 | Destabilizing | None | N | 0.081 | neutral | None | None | None | None | N |
N/H | 0.1361 | likely_benign | 0.1397 | benign | -0.197 | Destabilizing | 0.822 | D | 0.383 | neutral | N | 0.480678083 | None | None | N |
N/I | 0.4511 | ambiguous | 0.4427 | ambiguous | 0.055 | Stabilizing | 0.272 | N | 0.463 | neutral | N | 0.496580292 | None | None | N |
N/K | 0.374 | ambiguous | 0.3696 | ambiguous | 0.153 | Stabilizing | 0.175 | N | 0.303 | neutral | N | 0.504282927 | None | None | N |
N/L | 0.3658 | ambiguous | 0.3739 | ambiguous | 0.055 | Stabilizing | 0.124 | N | 0.469 | neutral | None | None | None | None | N |
N/M | 0.4266 | ambiguous | 0.4331 | ambiguous | 0.11 | Stabilizing | 0.883 | D | 0.373 | neutral | None | None | None | None | N |
N/P | 0.7286 | likely_pathogenic | 0.7357 | pathogenic | 0.028 | Stabilizing | 0.667 | D | 0.455 | neutral | None | None | None | None | N |
N/Q | 0.3563 | ambiguous | 0.3667 | ambiguous | -0.224 | Destabilizing | 0.22 | N | 0.383 | neutral | None | None | None | None | N |
N/R | 0.4783 | ambiguous | 0.4825 | ambiguous | 0.214 | Stabilizing | 0.22 | N | 0.381 | neutral | None | None | None | None | N |
N/S | 0.1129 | likely_benign | 0.1153 | benign | -0.017 | Destabilizing | 0.042 | N | 0.368 | neutral | N | 0.51038218 | None | None | N |
N/T | 0.1986 | likely_benign | 0.1992 | benign | 0.04 | Stabilizing | 0.001 | N | 0.116 | neutral | D | 0.524794272 | None | None | N |
N/V | 0.4267 | ambiguous | 0.4281 | ambiguous | 0.028 | Stabilizing | 0.124 | N | 0.467 | neutral | None | None | None | None | N |
N/W | 0.8044 | likely_pathogenic | 0.8122 | pathogenic | -0.829 | Destabilizing | 0.958 | D | 0.475 | neutral | None | None | None | None | N |
N/Y | 0.2159 | likely_benign | 0.2192 | benign | -0.497 | Destabilizing | 0.602 | D | 0.405 | neutral | N | 0.519203997 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.