Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23595 | 71008;71009;71010 | chr2:178575349;178575348;178575347 | chr2:179440076;179440075;179440074 |
N2AB | 21954 | 66085;66086;66087 | chr2:178575349;178575348;178575347 | chr2:179440076;179440075;179440074 |
N2A | 21027 | 63304;63305;63306 | chr2:178575349;178575348;178575347 | chr2:179440076;179440075;179440074 |
N2B | 14530 | 43813;43814;43815 | chr2:178575349;178575348;178575347 | chr2:179440076;179440075;179440074 |
Novex-1 | 14655 | 44188;44189;44190 | chr2:178575349;178575348;178575347 | chr2:179440076;179440075;179440074 |
Novex-2 | 14722 | 44389;44390;44391 | chr2:178575349;178575348;178575347 | chr2:179440076;179440075;179440074 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs886055249 | -1.718 | 0.998 | D | 0.833 | 0.861 | 0.916108489367 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
L/P | rs886055249 | -1.718 | 0.998 | D | 0.833 | 0.861 | 0.916108489367 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/P | rs886055249 | -1.718 | 0.998 | D | 0.833 | 0.861 | 0.916108489367 | gnomAD-4.0.0 | 6.4075E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.19683E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9069 | likely_pathogenic | 0.8919 | pathogenic | -2.353 | Highly Destabilizing | 0.969 | D | 0.788 | deleterious | None | None | None | None | N |
L/C | 0.8079 | likely_pathogenic | 0.8045 | pathogenic | -1.868 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
L/D | 0.9989 | likely_pathogenic | 0.9986 | pathogenic | -1.663 | Destabilizing | 0.996 | D | 0.831 | deleterious | None | None | None | None | N |
L/E | 0.9929 | likely_pathogenic | 0.9912 | pathogenic | -1.534 | Destabilizing | 0.994 | D | 0.811 | deleterious | None | None | None | None | N |
L/F | 0.8507 | likely_pathogenic | 0.8091 | pathogenic | -1.598 | Destabilizing | 0.957 | D | 0.885 | deleterious | None | None | None | None | N |
L/G | 0.9784 | likely_pathogenic | 0.9762 | pathogenic | -2.817 | Highly Destabilizing | 0.996 | D | 0.814 | deleterious | None | None | None | None | N |
L/H | 0.9843 | likely_pathogenic | 0.9814 | pathogenic | -1.965 | Destabilizing | 0.994 | D | 0.838 | deleterious | None | None | None | None | N |
L/I | 0.4252 | ambiguous | 0.3291 | benign | -1.07 | Destabilizing | 0.412 | N | 0.82 | deleterious | D | 0.635410968 | None | None | N |
L/K | 0.9869 | likely_pathogenic | 0.9849 | pathogenic | -1.624 | Destabilizing | 0.765 | D | 0.808 | deleterious | None | None | None | None | N |
L/M | 0.4105 | ambiguous | 0.3621 | ambiguous | -1.011 | Destabilizing | 0.988 | D | 0.847 | deleterious | None | None | None | None | N |
L/N | 0.9876 | likely_pathogenic | 0.9859 | pathogenic | -1.699 | Destabilizing | 0.996 | D | 0.828 | deleterious | None | None | None | None | N |
L/P | 0.9935 | likely_pathogenic | 0.9917 | pathogenic | -1.472 | Destabilizing | 0.998 | D | 0.833 | deleterious | D | 0.674605715 | None | None | N |
L/Q | 0.9633 | likely_pathogenic | 0.9534 | pathogenic | -1.71 | Destabilizing | 0.986 | D | 0.825 | deleterious | D | 0.642566994 | None | None | N |
L/R | 0.9712 | likely_pathogenic | 0.9677 | pathogenic | -1.162 | Destabilizing | 0.985 | D | 0.807 | deleterious | D | 0.649299768 | None | None | N |
L/S | 0.9877 | likely_pathogenic | 0.9848 | pathogenic | -2.533 | Highly Destabilizing | 0.991 | D | 0.802 | deleterious | None | None | None | None | N |
L/T | 0.9351 | likely_pathogenic | 0.9239 | pathogenic | -2.252 | Highly Destabilizing | 0.985 | D | 0.827 | deleterious | None | None | None | None | N |
L/V | 0.4126 | ambiguous | 0.335 | benign | -1.472 | Destabilizing | 0.48 | N | 0.829 | deleterious | D | 0.597214524 | None | None | N |
L/W | 0.9842 | likely_pathogenic | 0.9793 | pathogenic | -1.71 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
L/Y | 0.9824 | likely_pathogenic | 0.9776 | pathogenic | -1.478 | Destabilizing | 0.011 | N | 0.688 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.