Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23599 | 71020;71021;71022 | chr2:178575337;178575336;178575335 | chr2:179440064;179440063;179440062 |
N2AB | 21958 | 66097;66098;66099 | chr2:178575337;178575336;178575335 | chr2:179440064;179440063;179440062 |
N2A | 21031 | 63316;63317;63318 | chr2:178575337;178575336;178575335 | chr2:179440064;179440063;179440062 |
N2B | 14534 | 43825;43826;43827 | chr2:178575337;178575336;178575335 | chr2:179440064;179440063;179440062 |
Novex-1 | 14659 | 44200;44201;44202 | chr2:178575337;178575336;178575335 | chr2:179440064;179440063;179440062 |
Novex-2 | 14726 | 44401;44402;44403 | chr2:178575337;178575336;178575335 | chr2:179440064;179440063;179440062 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs772715686 | -0.83 | 0.003 | N | 0.239 | 0.197 | 0.215109475489 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.64E-05 | 8.89E-06 | 1.65673E-04 |
E/K | rs772715686 | -0.83 | 0.003 | N | 0.239 | 0.197 | 0.215109475489 | gnomAD-4.0.0 | 6.84326E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.7456E-05 | 0 | 6.29687E-06 | 0 | 1.65684E-05 |
E/Q | None | None | 0.434 | N | 0.479 | 0.109 | 0.258779203287 | gnomAD-4.0.0 | 6.84326E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99552E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2455 | likely_benign | 0.2228 | benign | -0.737 | Destabilizing | 0.003 | N | 0.21 | neutral | N | 0.470340925 | None | None | N |
E/C | 0.8775 | likely_pathogenic | 0.8797 | pathogenic | -0.434 | Destabilizing | 0.984 | D | 0.473 | neutral | None | None | None | None | N |
E/D | 0.2494 | likely_benign | 0.2213 | benign | -1.169 | Destabilizing | 0.07 | N | 0.393 | neutral | N | 0.520655102 | None | None | N |
E/F | 0.8487 | likely_pathogenic | 0.8442 | pathogenic | 0.047 | Stabilizing | 0.969 | D | 0.486 | neutral | None | None | None | None | N |
E/G | 0.2749 | likely_benign | 0.2484 | benign | -1.152 | Destabilizing | 0.491 | N | 0.319 | neutral | N | 0.5113049 | None | None | N |
E/H | 0.6265 | likely_pathogenic | 0.6191 | pathogenic | -0.242 | Destabilizing | 0.879 | D | 0.358 | neutral | None | None | None | None | N |
E/I | 0.5822 | likely_pathogenic | 0.5708 | pathogenic | 0.41 | Stabilizing | 0.826 | D | 0.481 | neutral | None | None | None | None | N |
E/K | 0.3138 | likely_benign | 0.2792 | benign | -0.621 | Destabilizing | 0.003 | N | 0.239 | neutral | N | 0.460182647 | None | None | N |
E/L | 0.611 | likely_pathogenic | 0.5716 | pathogenic | 0.41 | Stabilizing | 0.4 | N | 0.44 | neutral | None | None | None | None | N |
E/M | 0.5245 | ambiguous | 0.5184 | ambiguous | 0.834 | Stabilizing | 0.907 | D | 0.429 | neutral | None | None | None | None | N |
E/N | 0.4169 | ambiguous | 0.4006 | ambiguous | -1.206 | Destabilizing | 0.52 | D | 0.383 | neutral | None | None | None | None | N |
E/P | 0.98 | likely_pathogenic | 0.9773 | pathogenic | 0.05 | Stabilizing | 0.413 | N | 0.377 | neutral | None | None | None | None | N |
E/Q | 0.1799 | likely_benign | 0.174 | benign | -1.01 | Destabilizing | 0.434 | N | 0.479 | neutral | N | 0.467167334 | None | None | N |
E/R | 0.4804 | ambiguous | 0.4482 | ambiguous | -0.31 | Destabilizing | 0.416 | N | 0.401 | neutral | None | None | None | None | N |
E/S | 0.2843 | likely_benign | 0.2737 | benign | -1.55 | Destabilizing | 0.137 | N | 0.347 | neutral | None | None | None | None | N |
E/T | 0.3404 | ambiguous | 0.3269 | benign | -1.197 | Destabilizing | 0.515 | D | 0.328 | neutral | None | None | None | None | N |
E/V | 0.3571 | ambiguous | 0.349 | ambiguous | 0.05 | Stabilizing | 0.263 | N | 0.38 | neutral | N | 0.469148847 | None | None | N |
E/W | 0.9548 | likely_pathogenic | 0.9536 | pathogenic | 0.316 | Stabilizing | 0.997 | D | 0.563 | neutral | None | None | None | None | N |
E/Y | 0.7705 | likely_pathogenic | 0.7629 | pathogenic | 0.313 | Stabilizing | 0.988 | D | 0.437 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.