Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23605 | 71038;71039;71040 | chr2:178575319;178575318;178575317 | chr2:179440046;179440045;179440044 |
N2AB | 21964 | 66115;66116;66117 | chr2:178575319;178575318;178575317 | chr2:179440046;179440045;179440044 |
N2A | 21037 | 63334;63335;63336 | chr2:178575319;178575318;178575317 | chr2:179440046;179440045;179440044 |
N2B | 14540 | 43843;43844;43845 | chr2:178575319;178575318;178575317 | chr2:179440046;179440045;179440044 |
Novex-1 | 14665 | 44218;44219;44220 | chr2:178575319;178575318;178575317 | chr2:179440046;179440045;179440044 |
Novex-2 | 14732 | 44419;44420;44421 | chr2:178575319;178575318;178575317 | chr2:179440046;179440045;179440044 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs368325616 | None | 0.853 | D | 0.381 | 0.506 | 0.739614512186 | gnomAD-4.0.0 | 1.98455E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.51875E-05 | 0 | 1.65678E-05 |
V/M | None | None | 0.999 | D | 0.652 | 0.606 | 0.826566672349 | gnomAD-4.0.0 | 6.84329E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99554E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8895 | likely_pathogenic | 0.8878 | pathogenic | -2.738 | Highly Destabilizing | 0.987 | D | 0.622 | neutral | D | 0.556923213 | None | None | N |
V/C | 0.972 | likely_pathogenic | 0.9757 | pathogenic | -2.235 | Highly Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/D | 0.9978 | likely_pathogenic | 0.9979 | pathogenic | -3.437 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/E | 0.9936 | likely_pathogenic | 0.9934 | pathogenic | -3.157 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | D | 0.64666385 | None | None | N |
V/F | 0.9548 | likely_pathogenic | 0.9535 | pathogenic | -1.429 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
V/G | 0.9373 | likely_pathogenic | 0.935 | pathogenic | -3.249 | Highly Destabilizing | 1.0 | D | 0.865 | deleterious | D | 0.64666385 | None | None | N |
V/H | 0.9989 | likely_pathogenic | 0.999 | pathogenic | -2.879 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
V/I | 0.1228 | likely_benign | 0.1202 | benign | -1.228 | Destabilizing | 0.351 | N | 0.235 | neutral | None | None | None | None | N |
V/K | 0.9961 | likely_pathogenic | 0.9964 | pathogenic | -2.256 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/L | 0.7707 | likely_pathogenic | 0.7673 | pathogenic | -1.228 | Destabilizing | 0.853 | D | 0.381 | neutral | D | 0.526369335 | None | None | N |
V/M | 0.8528 | likely_pathogenic | 0.8487 | pathogenic | -1.586 | Destabilizing | 0.999 | D | 0.652 | neutral | D | 0.534299508 | None | None | N |
V/N | 0.993 | likely_pathogenic | 0.9932 | pathogenic | -2.827 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/P | 0.9968 | likely_pathogenic | 0.9969 | pathogenic | -1.72 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/Q | 0.9948 | likely_pathogenic | 0.9951 | pathogenic | -2.523 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
V/R | 0.9922 | likely_pathogenic | 0.9928 | pathogenic | -2.169 | Highly Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
V/S | 0.9781 | likely_pathogenic | 0.9785 | pathogenic | -3.301 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
V/T | 0.948 | likely_pathogenic | 0.9493 | pathogenic | -2.898 | Highly Destabilizing | 1.0 | D | 0.613 | neutral | None | None | None | None | N |
V/W | 0.9994 | likely_pathogenic | 0.9994 | pathogenic | -1.902 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
V/Y | 0.9946 | likely_pathogenic | 0.9947 | pathogenic | -1.765 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.